Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gm44428-201ENSMUST00000204474 874 ntBASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav13n-2A0A0G2JF93 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-2A0A0G2JF93 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-2A0A0G2JF93 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-2A0A0G2JF93 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-2A0A0G2JF93 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-2A0A0G2JF93 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-2A0A0G2JF93 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.2□□□□□ -0.3
Trav13n-2A0A0G2JF93 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-2A0A0G2JF93 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms