Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm43137-201ENSMUST00000198052 594 ntBASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms