Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Golph3-205ENSMUST00000228671 2842 ntBASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv12-2A0A0B4J1H1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-2A0A0B4J1H1 Gm27502-201ENSMUST00000183495 199 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms