Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6n-6A0A075B6B2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-6A0A075B6B2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav6n-6A0A075B6B2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-6A0A075B6B2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav6n-6A0A075B6B2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-6A0A075B6B2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-6A0A075B6B2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-6A0A075B6B2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms