Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4n-4A0A075B615 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4n-4A0A075B615 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.87□□□□□ -0.19
Trav4n-4A0A075B615 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav4n-4A0A075B615 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Gm45855-201ENSMUST00000212546 880 ntBASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav4n-4A0A075B615 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms