Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Gm43137-201ENSMUST00000198052 594 ntBASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Trav13d-1A0A075B606 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13d-1A0A075B606 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13d-1A0A075B606 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13d-1A0A075B606 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-1A0A075B606 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Serp2-204ENSMUST00000228055 705 ntBASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-1A0A075B606 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13d-1A0A075B606 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav13d-1A0A075B606 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-1A0A075B606 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-1A0A075B606 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Trav13d-1A0A075B606 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-1A0A075B606 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav13d-1A0A075B606 Mir7075-201ENSMUST00000184187 82 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms