Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Mipep-204ENSMUST00000225043 1548 ntBASIC31.96■■■□□ 2.71
Ripk4Q9ERK0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ripk4Q9ERK0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Ripk4Q9ERK0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ripk4Q9ERK0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ripk4Q9ERK0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ripk4Q9ERK0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.91■■■□□ 2.7
Ripk4Q9ERK0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ripk4Q9ERK0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ripk4Q9ERK0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ripk4Q9ERK0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ripk4Q9ERK0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
Ripk4Q9ERK0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ripk4Q9ERK0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Ripk4Q9ERK0 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.8■■■□□ 2.68
Ripk4Q9ERK0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ripk4Q9ERK0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.77■■■□□ 2.68
Ripk4Q9ERK0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Ripk4Q9ERK0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ripk4Q9ERK0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ripk4Q9ERK0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Ripk4Q9ERK0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ripk4Q9ERK0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.72■■■□□ 2.67
Ripk4Q9ERK0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ripk4Q9ERK0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ripk4Q9ERK0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ripk4Q9ERK0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Ripk4Q9ERK0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ripk4Q9ERK0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ripk4Q9ERK0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.66■■■□□ 2.66
Ripk4Q9ERK0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ripk4Q9ERK0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ripk4Q9ERK0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.64■■■□□ 2.66
Ripk4Q9ERK0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ripk4Q9ERK0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ripk4Q9ERK0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.59■■■□□ 2.65
Ripk4Q9ERK0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ripk4Q9ERK0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ripk4Q9ERK0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.56■■■□□ 2.64
Ripk4Q9ERK0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.53■■■□□ 2.64
Ripk4Q9ERK0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ripk4Q9ERK0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.49■■■□□ 2.63
Ripk4Q9ERK0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.49■■■□□ 2.63
Ripk4Q9ERK0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ripk4Q9ERK0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ripk4Q9ERK0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.45■■■□□ 2.63
Ripk4Q9ERK0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ripk4Q9ERK0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ripk4Q9ERK0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ripk4Q9ERK0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Ripk4Q9ERK0 Gm45855-201ENSMUST00000212546 880 ntBASIC31.41■■■□□ 2.62
Ripk4Q9ERK0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ripk4Q9ERK0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ripk4Q9ERK0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ripk4Q9ERK0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.32■■■□□ 2.6
Ripk4Q9ERK0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ripk4Q9ERK0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ripk4Q9ERK0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.3■■■□□ 2.6
Ripk4Q9ERK0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ripk4Q9ERK0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ripk4Q9ERK0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ripk4Q9ERK0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ripk4Q9ERK0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Ripk4Q9ERK0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ripk4Q9ERK0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ripk4Q9ERK0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ripk4Q9ERK0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ripk4Q9ERK0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Ripk4Q9ERK0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ripk4Q9ERK0 Gm9397-201ENSMUST00000200125 605 ntBASIC31.18■■■□□ 2.58
Ripk4Q9ERK0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ripk4Q9ERK0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.17■■■□□ 2.58
Ripk4Q9ERK0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ripk4Q9ERK0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
Ripk4Q9ERK0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.14■■■□□ 2.58
Ripk4Q9ERK0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.14■■■□□ 2.58
Ripk4Q9ERK0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
Ripk4Q9ERK0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ripk4Q9ERK0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ripk4Q9ERK0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.09■■■□□ 2.57
Ripk4Q9ERK0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ripk4Q9ERK0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Ripk4Q9ERK0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ripk4Q9ERK0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ripk4Q9ERK0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ripk4Q9ERK0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Ripk4Q9ERK0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.06■■■□□ 2.56
Ripk4Q9ERK0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Ripk4Q9ERK0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.04■■■□□ 2.56
Ripk4Q9ERK0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ripk4Q9ERK0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ripk4Q9ERK0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ripk4Q9ERK0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ripk4Q9ERK0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
Ripk4Q9ERK0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ripk4Q9ERK0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ripk4Q9ERK0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
Ripk4Q9ERK0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ripk4Q9ERK0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Ripk4Q9ERK0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms