Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Lysmd1Q9D0E3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Lysmd1Q9D0E3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.27■■■□□ 2.44
Lysmd1Q9D0E3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Lysmd1Q9D0E3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Lysmd1Q9D0E3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
Lysmd1Q9D0E3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.23■■■□□ 2.43
Lysmd1Q9D0E3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lysmd1Q9D0E3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Lysmd1Q9D0E3 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.17■■■□□ 2.42
Lysmd1Q9D0E3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Lysmd1Q9D0E3 Gm8503-201ENSMUST00000118131 455 ntBASIC30.14■■■□□ 2.42
Lysmd1Q9D0E3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Lysmd1Q9D0E3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Lysmd1Q9D0E3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.11■■■□□ 2.41
Lysmd1Q9D0E3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Lysmd1Q9D0E3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Lysmd1Q9D0E3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Lysmd1Q9D0E3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.03■■■□□ 2.4
Lysmd1Q9D0E3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.97■■■□□ 2.39
Lysmd1Q9D0E3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Lysmd1Q9D0E3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
Lysmd1Q9D0E3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Lysmd1Q9D0E3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Lysmd1Q9D0E3 Gm6821-201ENSMUST00000107540 542 ntBASIC29.89■■■□□ 2.38
Lysmd1Q9D0E3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Lysmd1Q9D0E3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
Lysmd1Q9D0E3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.88■■■□□ 2.37
Lysmd1Q9D0E3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.87■■■□□ 2.37
Lysmd1Q9D0E3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Lysmd1Q9D0E3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Lysmd1Q9D0E3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.85■■■□□ 2.37
Lysmd1Q9D0E3 Psd-208ENSMUST00000224556 2034 ntBASIC29.83■■■□□ 2.37
Lysmd1Q9D0E3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Lysmd1Q9D0E3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.8■■■□□ 2.36
Lysmd1Q9D0E3 Gm24970-201ENSMUST00000175582 82 ntBASIC29.75■■■□□ 2.35
Lysmd1Q9D0E3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Lysmd1Q9D0E3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
Lysmd1Q9D0E3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.72■■■□□ 2.35
Lysmd1Q9D0E3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Lysmd1Q9D0E3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.7■■■□□ 2.35
Lysmd1Q9D0E3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Lysmd1Q9D0E3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Lysmd1Q9D0E3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Lysmd1Q9D0E3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Lysmd1Q9D0E3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.58■■■□□ 2.33
Lysmd1Q9D0E3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Lysmd1Q9D0E3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.54■■■□□ 2.32
Lysmd1Q9D0E3 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.53■■■□□ 2.32
Lysmd1Q9D0E3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Lysmd1Q9D0E3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.53■■■□□ 2.32
Lysmd1Q9D0E3 Gm15039-201ENSMUST00000118914 875 ntBASIC29.51■■■□□ 2.31
Lysmd1Q9D0E3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Lysmd1Q9D0E3 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.48■■■□□ 2.31
Lysmd1Q9D0E3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Lysmd1Q9D0E3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Lysmd1Q9D0E3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.43■■■□□ 2.3
Lysmd1Q9D0E3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.41■■■□□ 2.3
Lysmd1Q9D0E3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29.41■■■□□ 2.3
Lysmd1Q9D0E3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Lysmd1Q9D0E3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Lysmd1Q9D0E3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
Lysmd1Q9D0E3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.38■■■□□ 2.29
Lysmd1Q9D0E3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Lysmd1Q9D0E3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Lysmd1Q9D0E3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.36■■■□□ 2.29
Lysmd1Q9D0E3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.36■■■□□ 2.29
Lysmd1Q9D0E3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Lysmd1Q9D0E3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Lysmd1Q9D0E3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Lysmd1Q9D0E3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Lysmd1Q9D0E3 Mir6538-201ENSMUST00000183713 110 ntBASIC29.28■■■□□ 2.28
Lysmd1Q9D0E3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.27■■■□□ 2.28
Lysmd1Q9D0E3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Lysmd1Q9D0E3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Lysmd1Q9D0E3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC29.22■■■□□ 2.27
Lysmd1Q9D0E3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Lysmd1Q9D0E3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Lysmd1Q9D0E3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Lysmd1Q9D0E3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Lysmd1Q9D0E3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Lysmd1Q9D0E3 Cap2-205ENSMUST00000225824 1634 ntBASIC29.2■■■□□ 2.27
Lysmd1Q9D0E3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Lysmd1Q9D0E3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Lysmd1Q9D0E3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Lysmd1Q9D0E3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
Lysmd1Q9D0E3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.18■■■□□ 2.26
Lysmd1Q9D0E3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.18■■■□□ 2.26
Lysmd1Q9D0E3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.16■■■□□ 2.26
Lysmd1Q9D0E3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Lysmd1Q9D0E3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.15■■■□□ 2.26
Lysmd1Q9D0E3 Gm7432-201ENSMUST00000210343 879 ntBASIC29.14■■■□□ 2.26
Lysmd1Q9D0E3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Lysmd1Q9D0E3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Lysmd1Q9D0E3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Lysmd1Q9D0E3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Lysmd1Q9D0E3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Lysmd1Q9D0E3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
Lysmd1Q9D0E3 Gm11175-201ENSMUST00000116172 543 ntBASIC29.08■■■□□ 2.25
Lysmd1Q9D0E3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms