Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Gm23366-201ENSMUST00000175022 89 ntBASIC20.26■□□□□ 0.83
Pdzd11Q9CZG9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzd11Q9CZG9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd11Q9CZG9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd11Q9CZG9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd11Q9CZG9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd11Q9CZG9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd11Q9CZG9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd11Q9CZG9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pdzd11Q9CZG9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pdzd11Q9CZG9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd11Q9CZG9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd11Q9CZG9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd11Q9CZG9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd11Q9CZG9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd11Q9CZG9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd11Q9CZG9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd11Q9CZG9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd11Q9CZG9 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.15■□□□□ 0.82
Pdzd11Q9CZG9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdzd11Q9CZG9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdzd11Q9CZG9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pdzd11Q9CZG9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pdzd11Q9CZG9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdzd11Q9CZG9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdzd11Q9CZG9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdzd11Q9CZG9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdzd11Q9CZG9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdzd11Q9CZG9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pdzd11Q9CZG9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdzd11Q9CZG9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pdzd11Q9CZG9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdzd11Q9CZG9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzd11Q9CZG9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdzd11Q9CZG9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pdzd11Q9CZG9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzd11Q9CZG9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzd11Q9CZG9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdzd11Q9CZG9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzd11Q9CZG9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdzd11Q9CZG9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.04■□□□□ 0.8
Pdzd11Q9CZG9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdzd11Q9CZG9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pdzd11Q9CZG9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdzd11Q9CZG9 Amer2-203ENSMUST00000225247 2662 ntBASIC20.02■□□□□ 0.8
Pdzd11Q9CZG9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdzd11Q9CZG9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdzd11Q9CZG9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20■□□□□ 0.79
Pdzd11Q9CZG9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdzd11Q9CZG9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pdzd11Q9CZG9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdzd11Q9CZG9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pdzd11Q9CZG9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdzd11Q9CZG9 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.98■□□□□ 0.79
Pdzd11Q9CZG9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdzd11Q9CZG9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdzd11Q9CZG9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdzd11Q9CZG9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.96■□□□□ 0.79
Pdzd11Q9CZG9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdzd11Q9CZG9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdzd11Q9CZG9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdzd11Q9CZG9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pdzd11Q9CZG9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdzd11Q9CZG9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdzd11Q9CZG9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdzd11Q9CZG9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdzd11Q9CZG9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdzd11Q9CZG9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pdzd11Q9CZG9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdzd11Q9CZG9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdzd11Q9CZG9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdzd11Q9CZG9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdzd11Q9CZG9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pdzd11Q9CZG9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.9■□□□□ 0.78
Pdzd11Q9CZG9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdzd11Q9CZG9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pdzd11Q9CZG9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdzd11Q9CZG9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdzd11Q9CZG9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdzd11Q9CZG9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.86■□□□□ 0.77
Pdzd11Q9CZG9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pdzd11Q9CZG9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdzd11Q9CZG9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdzd11Q9CZG9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdzd11Q9CZG9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pdzd11Q9CZG9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdzd11Q9CZG9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdzd11Q9CZG9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdzd11Q9CZG9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdzd11Q9CZG9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdzd11Q9CZG9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdzd11Q9CZG9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.81■□□□□ 0.76
Pdzd11Q9CZG9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdzd11Q9CZG9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdzd11Q9CZG9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdzd11Q9CZG9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdzd11Q9CZG9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pdzd11Q9CZG9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdzd11Q9CZG9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdzd11Q9CZG9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms