Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC17.01■□□□□ 0.31
KRTAP3-3Q9BYR6 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRTAP3-3Q9BYR6 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRTAP3-3Q9BYR6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRTAP3-3Q9BYR6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC17■□□□□ 0.31
KRTAP3-3Q9BYR6 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC17■□□□□ 0.31
KRTAP3-3Q9BYR6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC17■□□□□ 0.31
KRTAP3-3Q9BYR6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRTAP3-3Q9BYR6 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRTAP3-3Q9BYR6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.99■□□□□ 0.31
KRTAP3-3Q9BYR6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC16.99■□□□□ 0.31
KRTAP3-3Q9BYR6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC16.98■□□□□ 0.31
KRTAP3-3Q9BYR6 AL136370.1-201ENST00000608166 691 ntBASIC16.97■□□□□ 0.31
KRTAP3-3Q9BYR6 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC16.94■□□□□ 0.3
KRTAP3-3Q9BYR6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRTAP3-3Q9BYR6 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.93■□□□□ 0.3
KRTAP3-3Q9BYR6 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC16.93■□□□□ 0.3
KRTAP3-3Q9BYR6 RN7SL832P-201ENST00000607781 1756 ntBASIC16.92■□□□□ 0.3
KRTAP3-3Q9BYR6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRTAP3-3Q9BYR6 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.92■□□□□ 0.3
KRTAP3-3Q9BYR6 AC090079.2-201ENST00000575289 768 ntBASIC16.92■□□□□ 0.3
KRTAP3-3Q9BYR6 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRTAP3-3Q9BYR6 AC008147.4-201ENST00000617570 1204 ntBASIC16.9■□□□□ 0.3
KRTAP3-3Q9BYR6 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KRTAP3-3Q9BYR6 MTND2P25-201ENST00000449028 610 ntBASIC16.89■□□□□ 0.29
KRTAP3-3Q9BYR6 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.89■□□□□ 0.29
KRTAP3-3Q9BYR6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC16.89■□□□□ 0.29
KRTAP3-3Q9BYR6 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC16.89■□□□□ 0.29
KRTAP3-3Q9BYR6 AC008267.7-201ENST00000624570 1194 ntBASIC16.89■□□□□ 0.29
KRTAP3-3Q9BYR6 AL117351.1-201ENST00000438864 766 ntBASIC16.88■□□□□ 0.29
KRTAP3-3Q9BYR6 AC060766.1-201ENST00000590824 627 ntBASIC16.88■□□□□ 0.29
KRTAP3-3Q9BYR6 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC16.87■□□□□ 0.29
KRTAP3-3Q9BYR6 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.87■□□□□ 0.29
KRTAP3-3Q9BYR6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRTAP3-3Q9BYR6 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC16.86■□□□□ 0.29
KRTAP3-3Q9BYR6 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRTAP3-3Q9BYR6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.85■□□□□ 0.29
KRTAP3-3Q9BYR6 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRTAP3-3Q9BYR6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC16.84■□□□□ 0.29
KRTAP3-3Q9BYR6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC16.84■□□□□ 0.29
KRTAP3-3Q9BYR6 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC16.84■□□□□ 0.29
KRTAP3-3Q9BYR6 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC16.84■□□□□ 0.29
KRTAP3-3Q9BYR6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC16.83■□□□□ 0.28
KRTAP3-3Q9BYR6 HSFY1P1-201ENST00000423928 1178 ntBASIC16.82■□□□□ 0.28
KRTAP3-3Q9BYR6 RN7SL440P-201ENST00000577855 343 ntBASIC16.82■□□□□ 0.28
KRTAP3-3Q9BYR6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC16.81■□□□□ 0.28
KRTAP3-3Q9BYR6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC16.81■□□□□ 0.28
KRTAP3-3Q9BYR6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC16.81■□□□□ 0.28
KRTAP3-3Q9BYR6 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC16.8■□□□□ 0.28
KRTAP3-3Q9BYR6 AC027281.2-201ENST00000623856 713 ntBASIC16.8■□□□□ 0.28
KRTAP3-3Q9BYR6 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
KRTAP3-3Q9BYR6 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
KRTAP3-3Q9BYR6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC16.79■□□□□ 0.28
KRTAP3-3Q9BYR6 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRTAP3-3Q9BYR6 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC16.78■□□□□ 0.28
KRTAP3-3Q9BYR6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRTAP3-3Q9BYR6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.76■□□□□ 0.27
KRTAP3-3Q9BYR6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC16.75■□□□□ 0.27
KRTAP3-3Q9BYR6 AC105148.1-201ENST00000604961 409 ntBASIC16.75■□□□□ 0.27
KRTAP3-3Q9BYR6 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC16.75■□□□□ 0.27
KRTAP3-3Q9BYR6 AP000568.1-201ENST00000282964 442 ntBASIC16.74■□□□□ 0.27
KRTAP3-3Q9BYR6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
KRTAP3-3Q9BYR6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRTAP3-3Q9BYR6 HMGB3P14-201ENST00000494195 599 ntBASIC16.72■□□□□ 0.27
KRTAP3-3Q9BYR6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRTAP3-3Q9BYR6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC16.71■□□□□ 0.27
KRTAP3-3Q9BYR6 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC16.71■□□□□ 0.27
KRTAP3-3Q9BYR6 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.7■□□□□ 0.26
KRTAP3-3Q9BYR6 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.7■□□□□ 0.26
KRTAP3-3Q9BYR6 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KRTAP3-3Q9BYR6 AL512356.3-201ENST00000623005 461 ntBASIC16.7■□□□□ 0.26
KRTAP3-3Q9BYR6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC16.69■□□□□ 0.26
KRTAP3-3Q9BYR6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC16.69■□□□□ 0.26
KRTAP3-3Q9BYR6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRTAP3-3Q9BYR6 AC115989.2-201ENST00000578640 563 ntBASIC16.67■□□□□ 0.26
KRTAP3-3Q9BYR6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC16.66■□□□□ 0.26
KRTAP3-3Q9BYR6 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC16.66■□□□□ 0.26
KRTAP3-3Q9BYR6 AC093783.1-201ENST00000612976 329 ntBASIC16.65■□□□□ 0.26
KRTAP3-3Q9BYR6 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC16.63■□□□□ 0.25
KRTAP3-3Q9BYR6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRTAP3-3Q9BYR6 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.62■□□□□ 0.25
KRTAP3-3Q9BYR6 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC16.62■□□□□ 0.25
KRTAP3-3Q9BYR6 AC022494.1-201ENST00000466044 728 ntBASIC16.61■□□□□ 0.25
KRTAP3-3Q9BYR6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC16.61■□□□□ 0.25
KRTAP3-3Q9BYR6 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.61■□□□□ 0.25
KRTAP3-3Q9BYR6 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
KRTAP3-3Q9BYR6 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC16.61■□□□□ 0.25
KRTAP3-3Q9BYR6 AL137246.1-201ENST00000607072 977 ntBASIC16.61■□□□□ 0.25
KRTAP3-3Q9BYR6 AC007688.1-201ENST00000475592 759 ntBASIC16.6■□□□□ 0.25
KRTAP3-3Q9BYR6 AL022393.1-201ENST00000625142 1677 ntBASIC16.59■□□□□ 0.25
KRTAP3-3Q9BYR6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC16.59■□□□□ 0.25
KRTAP3-3Q9BYR6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC16.58■□□□□ 0.24
KRTAP3-3Q9BYR6 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC16.57■□□□□ 0.24
KRTAP3-3Q9BYR6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRTAP3-3Q9BYR6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC16.55■□□□□ 0.24
KRTAP3-3Q9BYR6 RPL12P24-201ENST00000474907 486 ntBASIC16.54■□□□□ 0.24
KRTAP3-3Q9BYR6 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KRTAP3-3Q9BYR6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRTAP3-3Q9BYR6 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC16.54■□□□□ 0.24
KRTAP3-3Q9BYR6 AC022762.2-201ENST00000600308 1353 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms