Protein–RNA interactions for Protein: Q8CD33

6030452D12Rik, RIKEN cDNA 6030452D12 gene, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
6030452D12RikQ8CD33 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
6030452D12RikQ8CD33 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.3■□□□□ 0.84
6030452D12RikQ8CD33 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
6030452D12RikQ8CD33 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.26■□□□□ 0.83
6030452D12RikQ8CD33 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
6030452D12RikQ8CD33 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
6030452D12RikQ8CD33 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
6030452D12RikQ8CD33 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
6030452D12RikQ8CD33 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
6030452D12RikQ8CD33 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
6030452D12RikQ8CD33 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
6030452D12RikQ8CD33 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.21■□□□□ 0.83
6030452D12RikQ8CD33 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
6030452D12RikQ8CD33 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
6030452D12RikQ8CD33 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
6030452D12RikQ8CD33 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.19■□□□□ 0.82
6030452D12RikQ8CD33 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
6030452D12RikQ8CD33 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
6030452D12RikQ8CD33 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
6030452D12RikQ8CD33 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
6030452D12RikQ8CD33 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
6030452D12RikQ8CD33 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
6030452D12RikQ8CD33 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
6030452D12RikQ8CD33 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
6030452D12RikQ8CD33 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
6030452D12RikQ8CD33 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
6030452D12RikQ8CD33 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.13■□□□□ 0.81
6030452D12RikQ8CD33 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
6030452D12RikQ8CD33 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
6030452D12RikQ8CD33 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
6030452D12RikQ8CD33 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
6030452D12RikQ8CD33 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
6030452D12RikQ8CD33 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.11■□□□□ 0.81
6030452D12RikQ8CD33 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
6030452D12RikQ8CD33 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
6030452D12RikQ8CD33 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
6030452D12RikQ8CD33 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
6030452D12RikQ8CD33 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
6030452D12RikQ8CD33 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
6030452D12RikQ8CD33 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
6030452D12RikQ8CD33 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
6030452D12RikQ8CD33 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
6030452D12RikQ8CD33 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
6030452D12RikQ8CD33 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
6030452D12RikQ8CD33 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
6030452D12RikQ8CD33 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
6030452D12RikQ8CD33 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
6030452D12RikQ8CD33 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
6030452D12RikQ8CD33 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.02■□□□□ 0.8
6030452D12RikQ8CD33 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
6030452D12RikQ8CD33 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
6030452D12RikQ8CD33 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
6030452D12RikQ8CD33 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
6030452D12RikQ8CD33 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
6030452D12RikQ8CD33 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
6030452D12RikQ8CD33 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
6030452D12RikQ8CD33 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
6030452D12RikQ8CD33 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
6030452D12RikQ8CD33 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
6030452D12RikQ8CD33 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
6030452D12RikQ8CD33 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
6030452D12RikQ8CD33 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
6030452D12RikQ8CD33 Gm25262-201ENSMUST00000174934 133 ntBASIC19.95■□□□□ 0.78
6030452D12RikQ8CD33 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
6030452D12RikQ8CD33 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
6030452D12RikQ8CD33 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
6030452D12RikQ8CD33 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
6030452D12RikQ8CD33 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
6030452D12RikQ8CD33 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
6030452D12RikQ8CD33 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.92■□□□□ 0.78
6030452D12RikQ8CD33 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
6030452D12RikQ8CD33 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.91■□□□□ 0.78
6030452D12RikQ8CD33 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
6030452D12RikQ8CD33 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.88■□□□□ 0.77
6030452D12RikQ8CD33 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
6030452D12RikQ8CD33 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
6030452D12RikQ8CD33 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.84■□□□□ 0.77
6030452D12RikQ8CD33 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
6030452D12RikQ8CD33 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
6030452D12RikQ8CD33 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
6030452D12RikQ8CD33 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
6030452D12RikQ8CD33 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
6030452D12RikQ8CD33 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
6030452D12RikQ8CD33 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
6030452D12RikQ8CD33 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
6030452D12RikQ8CD33 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
6030452D12RikQ8CD33 Mipep-204ENSMUST00000225043 1548 ntBASIC19.79■□□□□ 0.76
6030452D12RikQ8CD33 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
6030452D12RikQ8CD33 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
6030452D12RikQ8CD33 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
6030452D12RikQ8CD33 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
6030452D12RikQ8CD33 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
6030452D12RikQ8CD33 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
6030452D12RikQ8CD33 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
6030452D12RikQ8CD33 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
6030452D12RikQ8CD33 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
6030452D12RikQ8CD33 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
6030452D12RikQ8CD33 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
6030452D12RikQ8CD33 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
6030452D12RikQ8CD33 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms