Protein–RNA interactions for Protein: Q8BQQ8

B430305J03Rik, RIKEN cDNA B430305J03 gene, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B430305J03RikQ8BQQ8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
B430305J03RikQ8BQQ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
B430305J03RikQ8BQQ8 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.18■□□□□ 0.82
B430305J03RikQ8BQQ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
B430305J03RikQ8BQQ8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
B430305J03RikQ8BQQ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
B430305J03RikQ8BQQ8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
B430305J03RikQ8BQQ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
B430305J03RikQ8BQQ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
B430305J03RikQ8BQQ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
B430305J03RikQ8BQQ8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
B430305J03RikQ8BQQ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
B430305J03RikQ8BQQ8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B430305J03RikQ8BQQ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
B430305J03RikQ8BQQ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
B430305J03RikQ8BQQ8 Mipep-204ENSMUST00000225043 1548 ntBASIC20.08■□□□□ 0.81
B430305J03RikQ8BQQ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
B430305J03RikQ8BQQ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
B430305J03RikQ8BQQ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
B430305J03RikQ8BQQ8 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.07■□□□□ 0.8
B430305J03RikQ8BQQ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.06■□□□□ 0.8
B430305J03RikQ8BQQ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
B430305J03RikQ8BQQ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
B430305J03RikQ8BQQ8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
B430305J03RikQ8BQQ8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
B430305J03RikQ8BQQ8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
B430305J03RikQ8BQQ8 Zxda-201ENSMUST00000117281 2621 ntBASIC20.04■□□□□ 0.8
B430305J03RikQ8BQQ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
B430305J03RikQ8BQQ8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
B430305J03RikQ8BQQ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.02■□□□□ 0.8
B430305J03RikQ8BQQ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
B430305J03RikQ8BQQ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
B430305J03RikQ8BQQ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20■□□□□ 0.79
B430305J03RikQ8BQQ8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
B430305J03RikQ8BQQ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
B430305J03RikQ8BQQ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
B430305J03RikQ8BQQ8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
B430305J03RikQ8BQQ8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
B430305J03RikQ8BQQ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B430305J03RikQ8BQQ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B430305J03RikQ8BQQ8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B430305J03RikQ8BQQ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.95■□□□□ 0.78
B430305J03RikQ8BQQ8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B430305J03RikQ8BQQ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
B430305J03RikQ8BQQ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
B430305J03RikQ8BQQ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
B430305J03RikQ8BQQ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
B430305J03RikQ8BQQ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.9■□□□□ 0.78
B430305J03RikQ8BQQ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
B430305J03RikQ8BQQ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
B430305J03RikQ8BQQ8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
B430305J03RikQ8BQQ8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
B430305J03RikQ8BQQ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
B430305J03RikQ8BQQ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
B430305J03RikQ8BQQ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
B430305J03RikQ8BQQ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
B430305J03RikQ8BQQ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.86■□□□□ 0.77
B430305J03RikQ8BQQ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
B430305J03RikQ8BQQ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
B430305J03RikQ8BQQ8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
B430305J03RikQ8BQQ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
B430305J03RikQ8BQQ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
B430305J03RikQ8BQQ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
B430305J03RikQ8BQQ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
B430305J03RikQ8BQQ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
B430305J03RikQ8BQQ8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
B430305J03RikQ8BQQ8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
B430305J03RikQ8BQQ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
B430305J03RikQ8BQQ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B430305J03RikQ8BQQ8 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.74■□□□□ 0.75
B430305J03RikQ8BQQ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
B430305J03RikQ8BQQ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
B430305J03RikQ8BQQ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
B430305J03RikQ8BQQ8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
B430305J03RikQ8BQQ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
B430305J03RikQ8BQQ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B430305J03RikQ8BQQ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
B430305J03RikQ8BQQ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B430305J03RikQ8BQQ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
B430305J03RikQ8BQQ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.65■□□□□ 0.74
B430305J03RikQ8BQQ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B430305J03RikQ8BQQ8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
B430305J03RikQ8BQQ8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B430305J03RikQ8BQQ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
B430305J03RikQ8BQQ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.63■□□□□ 0.73
B430305J03RikQ8BQQ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
B430305J03RikQ8BQQ8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B430305J03RikQ8BQQ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
B430305J03RikQ8BQQ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
B430305J03RikQ8BQQ8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
B430305J03RikQ8BQQ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
B430305J03RikQ8BQQ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
B430305J03RikQ8BQQ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
B430305J03RikQ8BQQ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
B430305J03RikQ8BQQ8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
B430305J03RikQ8BQQ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
B430305J03RikQ8BQQ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.58■□□□□ 0.72
B430305J03RikQ8BQQ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
B430305J03RikQ8BQQ8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
B430305J03RikQ8BQQ8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms