Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm16148-201ENSMUST00000119653 893 ntBASIC21.3■■□□□ 1
Sox21Q811W0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sox21Q811W0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox21Q811W0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sox21Q811W0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sox21Q811W0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox21Q811W0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox21Q811W0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox21Q811W0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox21Q811W0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sox21Q811W0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox21Q811W0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox21Q811W0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox21Q811W0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sox21Q811W0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox21Q811W0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sox21Q811W0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox21Q811W0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.16■□□□□ 0.98
Sox21Q811W0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Sox21Q811W0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox21Q811W0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.14■□□□□ 0.97
Sox21Q811W0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sox21Q811W0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox21Q811W0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.12■□□□□ 0.97
Sox21Q811W0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sox21Q811W0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.1■□□□□ 0.97
Sox21Q811W0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox21Q811W0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox21Q811W0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox21Q811W0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sox21Q811W0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.09■□□□□ 0.97
Sox21Q811W0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox21Q811W0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox21Q811W0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox21Q811W0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox21Q811W0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.04■□□□□ 0.96
Sox21Q811W0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox21Q811W0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox21Q811W0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.02■□□□□ 0.96
Sox21Q811W0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox21Q811W0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.01■□□□□ 0.95
Sox21Q811W0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sox21Q811W0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox21Q811W0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sox21Q811W0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox21Q811W0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.96■□□□□ 0.95
Sox21Q811W0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.96■□□□□ 0.95
Sox21Q811W0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox21Q811W0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox21Q811W0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sox21Q811W0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
Sox21Q811W0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox21Q811W0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox21Q811W0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox21Q811W0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox21Q811W0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox21Q811W0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox21Q811W0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox21Q811W0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox21Q811W0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox21Q811W0 Gm45855-201ENSMUST00000212546 880 ntBASIC20.85■□□□□ 0.93
Sox21Q811W0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox21Q811W0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.82■□□□□ 0.92
Sox21Q811W0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox21Q811W0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox21Q811W0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox21Q811W0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.8■□□□□ 0.92
Sox21Q811W0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox21Q811W0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox21Q811W0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox21Q811W0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox21Q811W0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sox21Q811W0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox21Q811W0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox21Q811W0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox21Q811W0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox21Q811W0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Sox21Q811W0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox21Q811W0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox21Q811W0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.7■□□□□ 0.9
Sox21Q811W0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.7■□□□□ 0.9
Sox21Q811W0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox21Q811W0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox21Q811W0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.69■□□□□ 0.9
Sox21Q811W0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sox21Q811W0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.68■□□□□ 0.9
Sox21Q811W0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.68■□□□□ 0.9
Sox21Q811W0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox21Q811W0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox21Q811W0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox21Q811W0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox21Q811W0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox21Q811W0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms