Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Srrm3Q80WV7 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.13■■□□□ 1.93
Srrm3Q80WV7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Srrm3Q80WV7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Srrm3Q80WV7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Srrm3Q80WV7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Srrm3Q80WV7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.08■■□□□ 1.93
Srrm3Q80WV7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Srrm3Q80WV7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Srrm3Q80WV7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Srrm3Q80WV7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Srrm3Q80WV7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Srrm3Q80WV7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Srrm3Q80WV7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Srrm3Q80WV7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Srrm3Q80WV7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.97■■□□□ 1.91
Srrm3Q80WV7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.97■■□□□ 1.91
Srrm3Q80WV7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Srrm3Q80WV7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Srrm3Q80WV7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Srrm3Q80WV7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Srrm3Q80WV7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Srrm3Q80WV7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Srrm3Q80WV7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Srrm3Q80WV7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Srrm3Q80WV7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Srrm3Q80WV7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Srrm3Q80WV7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Srrm3Q80WV7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Srrm3Q80WV7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Srrm3Q80WV7 Gm24804-201ENSMUST00000174982 85 ntBASIC26.84■■□□□ 1.89
Srrm3Q80WV7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Srrm3Q80WV7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Srrm3Q80WV7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Srrm3Q80WV7 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.81■■□□□ 1.88
Srrm3Q80WV7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Srrm3Q80WV7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Srrm3Q80WV7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Srrm3Q80WV7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Srrm3Q80WV7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Srrm3Q80WV7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.8■■□□□ 1.88
Srrm3Q80WV7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.79■■□□□ 1.88
Srrm3Q80WV7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.78■■□□□ 1.88
Srrm3Q80WV7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Srrm3Q80WV7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Srrm3Q80WV7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.77■■□□□ 1.88
Srrm3Q80WV7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Srrm3Q80WV7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.76■■□□□ 1.87
Srrm3Q80WV7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Srrm3Q80WV7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Srrm3Q80WV7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Srrm3Q80WV7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Srrm3Q80WV7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Srrm3Q80WV7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
Srrm3Q80WV7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Srrm3Q80WV7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Srrm3Q80WV7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Srrm3Q80WV7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Srrm3Q80WV7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Srrm3Q80WV7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Srrm3Q80WV7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Srrm3Q80WV7 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.61■■□□□ 1.85
Srrm3Q80WV7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Srrm3Q80WV7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Srrm3Q80WV7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Srrm3Q80WV7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Srrm3Q80WV7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.56■■□□□ 1.84
Srrm3Q80WV7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Srrm3Q80WV7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Srrm3Q80WV7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.51■■□□□ 1.83
Srrm3Q80WV7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
Srrm3Q80WV7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Srrm3Q80WV7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Srrm3Q80WV7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Srrm3Q80WV7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Srrm3Q80WV7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Srrm3Q80WV7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Srrm3Q80WV7 Zfp131-205ENSMUST00000223812 663 ntBASIC26.45■■□□□ 1.82
Srrm3Q80WV7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Srrm3Q80WV7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Srrm3Q80WV7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Srrm3Q80WV7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Srrm3Q80WV7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.43■■□□□ 1.82
Srrm3Q80WV7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Srrm3Q80WV7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Srrm3Q80WV7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Srrm3Q80WV7 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.41■■□□□ 1.82
Srrm3Q80WV7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.4■■□□□ 1.82
Srrm3Q80WV7 Amer2-203ENSMUST00000225247 2662 ntBASIC26.4■■□□□ 1.82
Srrm3Q80WV7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
Srrm3Q80WV7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Srrm3Q80WV7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Srrm3Q80WV7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Srrm3Q80WV7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Srrm3Q80WV7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Srrm3Q80WV7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Srrm3Q80WV7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Srrm3Q80WV7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Srrm3Q80WV7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Srrm3Q80WV7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms