Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25,91■■□□□ 1,74
Pcdh19Q80TF3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25,91■■□□□ 1,74
Pcdh19Q80TF3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Pcdh19Q80TF3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25,9■■□□□ 1,74
Pcdh19Q80TF3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Pcdh19Q80TF3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25,88■■□□□ 1,73
Pcdh19Q80TF3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Pcdh19Q80TF3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25,86■■□□□ 1,73
Pcdh19Q80TF3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Pcdh19Q80TF3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Pcdh19Q80TF3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Pcdh19Q80TF3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,82■■□□□ 1,72
Pcdh19Q80TF3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25,81■■□□□ 1,72
Pcdh19Q80TF3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Pcdh19Q80TF3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Pcdh19Q80TF3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25,77■■□□□ 1,72
Pcdh19Q80TF3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Pcdh19Q80TF3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Pcdh19Q80TF3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25,75■■□□□ 1,71
Pcdh19Q80TF3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Pcdh19Q80TF3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25,72■■□□□ 1,71
Pcdh19Q80TF3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Pcdh19Q80TF3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25,71■■□□□ 1,71
Pcdh19Q80TF3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25,7■■□□□ 1,7
Pcdh19Q80TF3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25,7■■□□□ 1,7
Pcdh19Q80TF3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Pcdh19Q80TF3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,67■■□□□ 1,7
Pcdh19Q80TF3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Pcdh19Q80TF3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25,66■■□□□ 1,7
Pcdh19Q80TF3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25,65■■□□□ 1,7
Pcdh19Q80TF3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25,65■■□□□ 1,7
Pcdh19Q80TF3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Pcdh19Q80TF3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25,6■■□□□ 1,69
Pcdh19Q80TF3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Pcdh19Q80TF3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Pcdh19Q80TF3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25,58■■□□□ 1,69
Pcdh19Q80TF3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25,58■■□□□ 1,69
Pcdh19Q80TF3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25,57■■□□□ 1,68
Pcdh19Q80TF3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Pcdh19Q80TF3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25,56■■□□□ 1,68
Pcdh19Q80TF3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25,56■■□□□ 1,68
Pcdh19Q80TF3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Pcdh19Q80TF3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Pcdh19Q80TF3 Tdp2-203ENSMUST00000223804 1136 ntBASIC25,51■■□□□ 1,67
Pcdh19Q80TF3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25,47■■□□□ 1,67
Pcdh19Q80TF3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
Pcdh19Q80TF3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Pcdh19Q80TF3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25,46■■□□□ 1,67
Pcdh19Q80TF3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25,46■■□□□ 1,67
Pcdh19Q80TF3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25,45■■□□□ 1,66
Pcdh19Q80TF3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25,45■■□□□ 1,66
Pcdh19Q80TF3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,43■■□□□ 1,66
Pcdh19Q80TF3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25,43■■□□□ 1,66
Pcdh19Q80TF3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25,43■■□□□ 1,66
Pcdh19Q80TF3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25,39■■□□□ 1,66
Pcdh19Q80TF3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25,38■■□□□ 1,65
Pcdh19Q80TF3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Pcdh19Q80TF3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,34■■□□□ 1,65
Pcdh19Q80TF3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Pcdh19Q80TF3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25,34■■□□□ 1,65
Pcdh19Q80TF3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25,33■■□□□ 1,65
Pcdh19Q80TF3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25,33■■□□□ 1,64
Pcdh19Q80TF3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Pcdh19Q80TF3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Pcdh19Q80TF3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Pcdh19Q80TF3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Pcdh19Q80TF3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Pcdh19Q80TF3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Pcdh19Q80TF3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Pcdh19Q80TF3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Pcdh19Q80TF3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25,27■■□□□ 1,64
Pcdh19Q80TF3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Pcdh19Q80TF3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25,26■■□□□ 1,63
Pcdh19Q80TF3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Pcdh19Q80TF3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Pcdh19Q80TF3 Gm45855-201ENSMUST00000212546 880 ntBASIC25,23■■□□□ 1,63
Pcdh19Q80TF3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Pcdh19Q80TF3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25,22■■□□□ 1,63
Pcdh19Q80TF3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25,21■■□□□ 1,63
Pcdh19Q80TF3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Pcdh19Q80TF3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25,19■■□□□ 1,62
Pcdh19Q80TF3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25,19■■□□□ 1,62
Pcdh19Q80TF3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Pcdh19Q80TF3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Pcdh19Q80TF3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Pcdh19Q80TF3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,61
Pcdh19Q80TF3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25,14■■□□□ 1,61
Pcdh19Q80TF3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25,13■■□□□ 1,61
Pcdh19Q80TF3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25,12■■□□□ 1,61
Pcdh19Q80TF3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Pcdh19Q80TF3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25,12■■□□□ 1,61
Pcdh19Q80TF3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25,12■■□□□ 1,61
Pcdh19Q80TF3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25,11■■□□□ 1,61
Pcdh19Q80TF3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25,11■■□□□ 1,61
Pcdh19Q80TF3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25,11■■□□□ 1,61
Pcdh19Q80TF3 Gm9397-201ENSMUST00000200125 605 ntBASIC25,1■■□□□ 1,61
Pcdh19Q80TF3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Pcdh19Q80TF3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25,09■■□□□ 1,61
Pcdh19Q80TF3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25,08■■□□□ 1,61
Pcdh19Q80TF3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25,08■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms