Protein–RNA interactions for Protein: Q6ZPJ3

Ube2o, (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2oQ6ZPJ3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31,1■■■□□ 2,57
Ube2oQ6ZPJ3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31,1■■■□□ 2,57
Ube2oQ6ZPJ3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31,09■■■□□ 2,57
Ube2oQ6ZPJ3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31,07■■■□□ 2,56
Ube2oQ6ZPJ3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31,05■■■□□ 2,56
Ube2oQ6ZPJ3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31,05■■■□□ 2,56
Ube2oQ6ZPJ3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31,04■■■□□ 2,56
Ube2oQ6ZPJ3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Ube2oQ6ZPJ3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31,03■■■□□ 2,56
Ube2oQ6ZPJ3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,02■■■□□ 2,56
Ube2oQ6ZPJ3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Ube2oQ6ZPJ3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30,97■■■□□ 2,55
Ube2oQ6ZPJ3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
Ube2oQ6ZPJ3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,92■■■□□ 2,54
Ube2oQ6ZPJ3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30,92■■■□□ 2,54
Ube2oQ6ZPJ3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30,92■■■□□ 2,54
Ube2oQ6ZPJ3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30,89■■■□□ 2,54
Ube2oQ6ZPJ3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30,88■■■□□ 2,53
Ube2oQ6ZPJ3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,85■■■□□ 2,53
Ube2oQ6ZPJ3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30,85■■■□□ 2,53
Ube2oQ6ZPJ3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30,84■■■□□ 2,53
Ube2oQ6ZPJ3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Ube2oQ6ZPJ3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30,83■■■□□ 2,53
Ube2oQ6ZPJ3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Ube2oQ6ZPJ3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Ube2oQ6ZPJ3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Ube2oQ6ZPJ3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30,81■■■□□ 2,52
Ube2oQ6ZPJ3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30,79■■■□□ 2,52
Ube2oQ6ZPJ3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Ube2oQ6ZPJ3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
Ube2oQ6ZPJ3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Ube2oQ6ZPJ3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Ube2oQ6ZPJ3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30,76■■■□□ 2,51
Ube2oQ6ZPJ3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Ube2oQ6ZPJ3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Ube2oQ6ZPJ3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30,73■■■□□ 2,51
Ube2oQ6ZPJ3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Ube2oQ6ZPJ3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30,67■■■□□ 2,5
Ube2oQ6ZPJ3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30,67■■■□□ 2,5
Ube2oQ6ZPJ3 Tdp2-203ENSMUST00000223804 1136 ntBASIC30,67■■■□□ 2,5
Ube2oQ6ZPJ3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Ube2oQ6ZPJ3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30,67■■■□□ 2,5
Ube2oQ6ZPJ3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Ube2oQ6ZPJ3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Ube2oQ6ZPJ3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30,64■■■□□ 2,5
Ube2oQ6ZPJ3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Ube2oQ6ZPJ3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30,64■■■□□ 2,5
Ube2oQ6ZPJ3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30,63■■■□□ 2,49
Ube2oQ6ZPJ3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30,59■■■□□ 2,49
Ube2oQ6ZPJ3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30,58■■■□□ 2,49
Ube2oQ6ZPJ3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30,56■■■□□ 2,48
Ube2oQ6ZPJ3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Ube2oQ6ZPJ3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30,49■■■□□ 2,47
Ube2oQ6ZPJ3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Ube2oQ6ZPJ3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30,48■■■□□ 2,47
Ube2oQ6ZPJ3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Ube2oQ6ZPJ3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,46■■■□□ 2,47
Ube2oQ6ZPJ3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30,46■■■□□ 2,47
Ube2oQ6ZPJ3 Gm45855-201ENSMUST00000212546 880 ntBASIC30,45■■■□□ 2,47
Ube2oQ6ZPJ3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Ube2oQ6ZPJ3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Ube2oQ6ZPJ3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30,42■■■□□ 2,46
Ube2oQ6ZPJ3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30,42■■■□□ 2,46
Ube2oQ6ZPJ3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30,39■■■□□ 2,46
Ube2oQ6ZPJ3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Ube2oQ6ZPJ3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30,37■■■□□ 2,45
Ube2oQ6ZPJ3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Ube2oQ6ZPJ3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,35■■■□□ 2,45
Ube2oQ6ZPJ3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Ube2oQ6ZPJ3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Ube2oQ6ZPJ3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Ube2oQ6ZPJ3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30,33■■■□□ 2,45
Ube2oQ6ZPJ3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30,33■■■□□ 2,45
Ube2oQ6ZPJ3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30,3■■■□□ 2,44
Ube2oQ6ZPJ3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30,29■■■□□ 2,44
Ube2oQ6ZPJ3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Ube2oQ6ZPJ3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30,28■■■□□ 2,44
Ube2oQ6ZPJ3 Gm9397-201ENSMUST00000200125 605 ntBASIC30,27■■■□□ 2,44
Ube2oQ6ZPJ3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30,27■■■□□ 2,44
Ube2oQ6ZPJ3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,44
Ube2oQ6ZPJ3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Ube2oQ6ZPJ3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
Ube2oQ6ZPJ3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30,23■■■□□ 2,43
Ube2oQ6ZPJ3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30,23■■■□□ 2,43
Ube2oQ6ZPJ3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30,23■■■□□ 2,43
Ube2oQ6ZPJ3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30,22■■■□□ 2,43
Ube2oQ6ZPJ3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Ube2oQ6ZPJ3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30,22■■■□□ 2,43
Ube2oQ6ZPJ3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Ube2oQ6ZPJ3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Ube2oQ6ZPJ3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30,18■■■□□ 2,42
Ube2oQ6ZPJ3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30,17■■■□□ 2,42
Ube2oQ6ZPJ3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30,17■■■□□ 2,42
Ube2oQ6ZPJ3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30,16■■■□□ 2,42
Ube2oQ6ZPJ3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30,16■■■□□ 2,42
Ube2oQ6ZPJ3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30,14■■■□□ 2,42
Ube2oQ6ZPJ3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30,14■■■□□ 2,41
Ube2oQ6ZPJ3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Ube2oQ6ZPJ3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30,11■■■□□ 2,41
Ube2oQ6ZPJ3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30,11■■■□□ 2,41
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms