Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Commd3Q63829 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Commd3Q63829 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Commd3Q63829 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Commd3Q63829 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Commd3Q63829 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Commd3Q63829 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Commd3Q63829 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Commd3Q63829 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Commd3Q63829 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Commd3Q63829 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Commd3Q63829 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Commd3Q63829 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Commd3Q63829 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Commd3Q63829 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Commd3Q63829 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.3■■□□□ 1
Commd3Q63829 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Commd3Q63829 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Commd3Q63829 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.27■■□□□ 1
Commd3Q63829 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.27■■□□□ 1
Commd3Q63829 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Commd3Q63829 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Commd3Q63829 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Commd3Q63829 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Commd3Q63829 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Commd3Q63829 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Commd3Q63829 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Commd3Q63829 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.23■□□□□ 0.99
Commd3Q63829 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Commd3Q63829 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Commd3Q63829 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Commd3Q63829 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
Commd3Q63829 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Commd3Q63829 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
Commd3Q63829 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Commd3Q63829 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Commd3Q63829 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Commd3Q63829 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Commd3Q63829 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Commd3Q63829 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Commd3Q63829 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Commd3Q63829 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Commd3Q63829 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Commd3Q63829 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.15■□□□□ 0.98
Commd3Q63829 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Commd3Q63829 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Commd3Q63829 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Commd3Q63829 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Commd3Q63829 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Commd3Q63829 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Commd3Q63829 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Commd3Q63829 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Commd3Q63829 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Commd3Q63829 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Commd3Q63829 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Commd3Q63829 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Commd3Q63829 Gm25238-201ENSMUST00000174914 89 ntBASIC21.09■□□□□ 0.97
Commd3Q63829 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Commd3Q63829 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Commd3Q63829 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Commd3Q63829 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Commd3Q63829 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Commd3Q63829 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Commd3Q63829 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Commd3Q63829 Amer2-203ENSMUST00000225247 2662 ntBASIC21.04■□□□□ 0.96
Commd3Q63829 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Commd3Q63829 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Commd3Q63829 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Commd3Q63829 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Commd3Q63829 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Commd3Q63829 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Commd3Q63829 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.99■□□□□ 0.95
Commd3Q63829 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Commd3Q63829 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Commd3Q63829 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Commd3Q63829 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Commd3Q63829 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.98■□□□□ 0.95
Commd3Q63829 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Commd3Q63829 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Commd3Q63829 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Commd3Q63829 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Commd3Q63829 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Commd3Q63829 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Commd3Q63829 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.92■□□□□ 0.94
Commd3Q63829 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Commd3Q63829 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Commd3Q63829 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Commd3Q63829 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Commd3Q63829 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.88■□□□□ 0.93
Commd3Q63829 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Commd3Q63829 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.88■□□□□ 0.93
Commd3Q63829 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.88■□□□□ 0.93
Commd3Q63829 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Commd3Q63829 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Commd3Q63829 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Commd3Q63829 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Commd3Q63829 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Commd3Q63829 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Commd3Q63829 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Commd3Q63829 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms