Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zic4Q61467 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zic4Q61467 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Zic4Q61467 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Zic4Q61467 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zic4Q61467 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zic4Q61467 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.29■■□□□ 1
Zic4Q61467 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zic4Q61467 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zic4Q61467 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.28■■□□□ 1
Zic4Q61467 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Zic4Q61467 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zic4Q61467 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.25■□□□□ 0.99
Zic4Q61467 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zic4Q61467 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.25■□□□□ 0.99
Zic4Q61467 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zic4Q61467 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zic4Q61467 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Zic4Q61467 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Zic4Q61467 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zic4Q61467 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zic4Q61467 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zic4Q61467 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zic4Q61467 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zic4Q61467 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zic4Q61467 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zic4Q61467 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zic4Q61467 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zic4Q61467 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zic4Q61467 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zic4Q61467 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zic4Q61467 Gm25238-201ENSMUST00000174914 89 ntBASIC21.16■□□□□ 0.98
Zic4Q61467 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Zic4Q61467 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zic4Q61467 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zic4Q61467 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zic4Q61467 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Zic4Q61467 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zic4Q61467 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zic4Q61467 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zic4Q61467 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Zic4Q61467 Amer2-203ENSMUST00000225247 2662 ntBASIC21.08■□□□□ 0.97
Zic4Q61467 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Zic4Q61467 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zic4Q61467 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Zic4Q61467 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zic4Q61467 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Zic4Q61467 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Zic4Q61467 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Zic4Q61467 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zic4Q61467 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Zic4Q61467 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zic4Q61467 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Zic4Q61467 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.97■□□□□ 0.95
Zic4Q61467 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Zic4Q61467 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zic4Q61467 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Zic4Q61467 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Zic4Q61467 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.94■□□□□ 0.94
Zic4Q61467 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zic4Q61467 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zic4Q61467 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.91■□□□□ 0.94
Zic4Q61467 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zic4Q61467 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.89■□□□□ 0.93
Zic4Q61467 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Zic4Q61467 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Zic4Q61467 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Zic4Q61467 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zic4Q61467 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zic4Q61467 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zic4Q61467 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.86■□□□□ 0.93
Zic4Q61467 Mipep-204ENSMUST00000225043 1548 ntBASIC20.86■□□□□ 0.93
Zic4Q61467 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.86■□□□□ 0.93
Zic4Q61467 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zic4Q61467 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Zic4Q61467 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zic4Q61467 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zic4Q61467 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.83■□□□□ 0.93
Zic4Q61467 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zic4Q61467 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Zic4Q61467 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.81■□□□□ 0.92
Zic4Q61467 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zic4Q61467 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zic4Q61467 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zic4Q61467 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zic4Q61467 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zic4Q61467 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zic4Q61467 Rab21-202ENSMUST00000218831 843 ntBASIC20.75■□□□□ 0.91
Zic4Q61467 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.75■□□□□ 0.91
Zic4Q61467 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zic4Q61467 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zic4Q61467 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Zic4Q61467 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Zic4Q61467 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.73■□□□□ 0.91
Zic4Q61467 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Zic4Q61467 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Zic4Q61467 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zic4Q61467 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zic4Q61467 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zic4Q61467 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms