Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Shroom1Q5SX79 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Shroom1Q5SX79 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom1Q5SX79 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shroom1Q5SX79 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
Shroom1Q5SX79 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.07■■■□□ 2.08
Shroom1Q5SX79 Peli2-204ENSMUST00000226513 1320 ntBASIC28.07■■■□□ 2.08
Shroom1Q5SX79 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Shroom1Q5SX79 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Shroom1Q5SX79 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Shroom1Q5SX79 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Shroom1Q5SX79 Mipep-204ENSMUST00000225043 1548 ntBASIC28■■■□□ 2.07
Shroom1Q5SX79 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Shroom1Q5SX79 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Shroom1Q5SX79 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Shroom1Q5SX79 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Shroom1Q5SX79 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Shroom1Q5SX79 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Shroom1Q5SX79 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
Shroom1Q5SX79 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Shroom1Q5SX79 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Shroom1Q5SX79 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Shroom1Q5SX79 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.83■■■□□ 2.05
Shroom1Q5SX79 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Shroom1Q5SX79 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom1Q5SX79 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom1Q5SX79 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Shroom1Q5SX79 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.8■■■□□ 2.04
Shroom1Q5SX79 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Shroom1Q5SX79 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.77■■■□□ 2.04
Shroom1Q5SX79 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom1Q5SX79 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom1Q5SX79 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.76■■■□□ 2.03
Shroom1Q5SX79 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom1Q5SX79 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Shroom1Q5SX79 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.73■■■□□ 2.03
Shroom1Q5SX79 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Shroom1Q5SX79 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Shroom1Q5SX79 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.69■■■□□ 2.02
Shroom1Q5SX79 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Shroom1Q5SX79 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.68■■■□□ 2.02
Shroom1Q5SX79 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Shroom1Q5SX79 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Shroom1Q5SX79 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Shroom1Q5SX79 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.64■■■□□ 2.02
Shroom1Q5SX79 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Shroom1Q5SX79 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Shroom1Q5SX79 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.57■■■□□ 2
Shroom1Q5SX79 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.57■■■□□ 2
Shroom1Q5SX79 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Shroom1Q5SX79 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.56■■■□□ 2
Shroom1Q5SX79 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.56■■■□□ 2
Shroom1Q5SX79 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Shroom1Q5SX79 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Shroom1Q5SX79 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Shroom1Q5SX79 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.53■■■□□ 2
Shroom1Q5SX79 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Shroom1Q5SX79 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Shroom1Q5SX79 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Shroom1Q5SX79 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Shroom1Q5SX79 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Shroom1Q5SX79 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Shroom1Q5SX79 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Shroom1Q5SX79 Gm45855-201ENSMUST00000212546 880 ntBASIC27.44■■□□□ 1.98
Shroom1Q5SX79 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Shroom1Q5SX79 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Shroom1Q5SX79 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Shroom1Q5SX79 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.39■■□□□ 1.98
Shroom1Q5SX79 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Shroom1Q5SX79 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.38■■□□□ 1.97
Shroom1Q5SX79 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom1Q5SX79 Gm9397-201ENSMUST00000200125 605 ntBASIC27.37■■□□□ 1.97
Shroom1Q5SX79 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.35■■□□□ 1.97
Shroom1Q5SX79 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom1Q5SX79 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
Shroom1Q5SX79 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.33■■□□□ 1.97
Shroom1Q5SX79 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom1Q5SX79 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom1Q5SX79 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom1Q5SX79 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Shroom1Q5SX79 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Shroom1Q5SX79 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
Shroom1Q5SX79 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Shroom1Q5SX79 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
Shroom1Q5SX79 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Shroom1Q5SX79 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Shroom1Q5SX79 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Shroom1Q5SX79 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.22■■□□□ 1.95
Shroom1Q5SX79 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.22■■□□□ 1.95
Shroom1Q5SX79 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.22■■□□□ 1.95
Shroom1Q5SX79 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Shroom1Q5SX79 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.2■■□□□ 1.95
Shroom1Q5SX79 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Shroom1Q5SX79 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Shroom1Q5SX79 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Shroom1Q5SX79 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.18■■□□□ 1.94
Shroom1Q5SX79 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Shroom1Q5SX79 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.16■■□□□ 1.94
Shroom1Q5SX79 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Shroom1Q5SX79 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms