Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Tmem40Q4FJU9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tmem40Q4FJU9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tmem40Q4FJU9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmem40Q4FJU9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmem40Q4FJU9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tmem40Q4FJU9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tmem40Q4FJU9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tmem40Q4FJU9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tmem40Q4FJU9 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.31■■□□□ 1.16
Tmem40Q4FJU9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tmem40Q4FJU9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tmem40Q4FJU9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Tmem40Q4FJU9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.28■■□□□ 1.16
Tmem40Q4FJU9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tmem40Q4FJU9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tmem40Q4FJU9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tmem40Q4FJU9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tmem40Q4FJU9 Peli2-204ENSMUST00000226513 1320 ntBASIC22.23■■□□□ 1.15
Tmem40Q4FJU9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tmem40Q4FJU9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Tmem40Q4FJU9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tmem40Q4FJU9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tmem40Q4FJU9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tmem40Q4FJU9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tmem40Q4FJU9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.2■■□□□ 1.14
Tmem40Q4FJU9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tmem40Q4FJU9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Tmem40Q4FJU9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.19■■□□□ 1.14
Tmem40Q4FJU9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Tmem40Q4FJU9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tmem40Q4FJU9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.18■■□□□ 1.14
Tmem40Q4FJU9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tmem40Q4FJU9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Tmem40Q4FJU9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.16■■□□□ 1.14
Tmem40Q4FJU9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tmem40Q4FJU9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tmem40Q4FJU9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.15■■□□□ 1.14
Tmem40Q4FJU9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Tmem40Q4FJU9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tmem40Q4FJU9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tmem40Q4FJU9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tmem40Q4FJU9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tmem40Q4FJU9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tmem40Q4FJU9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.06■■□□□ 1.12
Tmem40Q4FJU9 Gm45855-201ENSMUST00000212546 880 ntBASIC22.06■■□□□ 1.12
Tmem40Q4FJU9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tmem40Q4FJU9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tmem40Q4FJU9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tmem40Q4FJU9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tmem40Q4FJU9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Tmem40Q4FJU9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.01■■□□□ 1.11
Tmem40Q4FJU9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tmem40Q4FJU9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tmem40Q4FJU9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Tmem40Q4FJU9 Mipep-204ENSMUST00000225043 1548 ntBASIC21.98■■□□□ 1.11
Tmem40Q4FJU9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tmem40Q4FJU9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tmem40Q4FJU9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tmem40Q4FJU9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Tmem40Q4FJU9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tmem40Q4FJU9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.92■■□□□ 1.1
Tmem40Q4FJU9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tmem40Q4FJU9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Tmem40Q4FJU9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tmem40Q4FJU9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.9■■□□□ 1.1
Tmem40Q4FJU9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem40Q4FJU9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem40Q4FJU9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tmem40Q4FJU9 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.87■■□□□ 1.09
Tmem40Q4FJU9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tmem40Q4FJU9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem40Q4FJU9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tmem40Q4FJU9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tmem40Q4FJU9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem40Q4FJU9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem40Q4FJU9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tmem40Q4FJU9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.8■■□□□ 1.08
Tmem40Q4FJU9 Gm9397-201ENSMUST00000200125 605 ntBASIC21.8■■□□□ 1.08
Tmem40Q4FJU9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tmem40Q4FJU9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem40Q4FJU9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem40Q4FJU9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.78■■□□□ 1.08
Tmem40Q4FJU9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem40Q4FJU9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem40Q4FJU9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem40Q4FJU9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem40Q4FJU9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem40Q4FJU9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem40Q4FJU9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem40Q4FJU9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Tmem40Q4FJU9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.74■■□□□ 1.07
Tmem40Q4FJU9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tmem40Q4FJU9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem40Q4FJU9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem40Q4FJU9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.73■■□□□ 1.07
Tmem40Q4FJU9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem40Q4FJU9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Tmem40Q4FJU9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem40Q4FJU9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms