Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Lhx1P63006 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lhx1P63006 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Lhx1P63006 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.05■■□□□ 1.76
Lhx1P63006 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Lhx1P63006 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Lhx1P63006 Peli2-204ENSMUST00000226513 1320 ntBASIC26.03■■□□□ 1.76
Lhx1P63006 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Lhx1P63006 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Lhx1P63006 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Lhx1P63006 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Lhx1P63006 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Lhx1P63006 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lhx1P63006 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lhx1P63006 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Lhx1P63006 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lhx1P63006 Gm16148-201ENSMUST00000119653 893 ntBASIC25.91■■□□□ 1.74
Lhx1P63006 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lhx1P63006 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Lhx1P63006 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lhx1P63006 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Lhx1P63006 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lhx1P63006 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lhx1P63006 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.84■■□□□ 1.73
Lhx1P63006 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Lhx1P63006 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.84■■□□□ 1.73
Lhx1P63006 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Lhx1P63006 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lhx1P63006 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lhx1P63006 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Lhx1P63006 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Lhx1P63006 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Lhx1P63006 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Lhx1P63006 Zfp131-205ENSMUST00000223812 663 ntBASIC25.75■■□□□ 1.71
Lhx1P63006 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
Lhx1P63006 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Lhx1P63006 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lhx1P63006 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lhx1P63006 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Lhx1P63006 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Lhx1P63006 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Lhx1P63006 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.67■■□□□ 1.7
Lhx1P63006 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Lhx1P63006 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Lhx1P63006 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Lhx1P63006 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Lhx1P63006 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Lhx1P63006 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lhx1P63006 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Lhx1P63006 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Lhx1P63006 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
Lhx1P63006 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Lhx1P63006 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Lhx1P63006 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Lhx1P63006 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Lhx1P63006 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Lhx1P63006 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Lhx1P63006 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.55■■□□□ 1.68
Lhx1P63006 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.55■■□□□ 1.68
Lhx1P63006 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lhx1P63006 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.53■■□□□ 1.68
Lhx1P63006 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lhx1P63006 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.52■■□□□ 1.68
Lhx1P63006 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lhx1P63006 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.51■■□□□ 1.67
Lhx1P63006 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lhx1P63006 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lhx1P63006 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lhx1P63006 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lhx1P63006 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Lhx1P63006 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lhx1P63006 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lhx1P63006 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lhx1P63006 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Lhx1P63006 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Lhx1P63006 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
Lhx1P63006 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.44■■□□□ 1.66
Lhx1P63006 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.42■■□□□ 1.66
Lhx1P63006 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.42■■□□□ 1.66
Lhx1P63006 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Lhx1P63006 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.4■■□□□ 1.66
Lhx1P63006 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Lhx1P63006 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.39■■□□□ 1.66
Lhx1P63006 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
Lhx1P63006 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lhx1P63006 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.38■■□□□ 1.65
Lhx1P63006 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lhx1P63006 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.37■■□□□ 1.65
Lhx1P63006 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lhx1P63006 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Lhx1P63006 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lhx1P63006 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.34■■□□□ 1.65
Lhx1P63006 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lhx1P63006 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Lhx1P63006 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.29■■□□□ 1.64
Lhx1P63006 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lhx1P63006 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Lhx1P63006 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Lhx1P63006 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Lhx1P63006 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms