Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.72■■□□□ 1.87
Lbx1P52955 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.7■■□□□ 1.86
Lbx1P52955 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
Lbx1P52955 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.69■■□□□ 1.86
Lbx1P52955 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lbx1P52955 Peli2-204ENSMUST00000226513 1320 ntBASIC26.66■■□□□ 1.86
Lbx1P52955 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lbx1P52955 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Lbx1P52955 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Lbx1P52955 Gm8503-201ENSMUST00000118131 455 ntBASIC26.62■■□□□ 1.85
Lbx1P52955 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Lbx1P52955 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.57■■□□□ 1.84
Lbx1P52955 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Lbx1P52955 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Lbx1P52955 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.55■■□□□ 1.84
Lbx1P52955 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Lbx1P52955 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Lbx1P52955 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lbx1P52955 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lbx1P52955 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Lbx1P52955 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.45■■□□□ 1.82
Lbx1P52955 Gm6821-201ENSMUST00000107540 542 ntBASIC26.44■■□□□ 1.82
Lbx1P52955 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lbx1P52955 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lbx1P52955 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Lbx1P52955 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.35■■□□□ 1.81
Lbx1P52955 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lbx1P52955 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lbx1P52955 Gm15039-201ENSMUST00000118914 875 ntBASIC26.34■■□□□ 1.81
Lbx1P52955 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.33■■□□□ 1.81
Lbx1P52955 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.33■■□□□ 1.81
Lbx1P52955 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lbx1P52955 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Lbx1P52955 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.27■■□□□ 1.8
Lbx1P52955 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Lbx1P52955 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Lbx1P52955 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Lbx1P52955 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lbx1P52955 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lbx1P52955 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lbx1P52955 Gm24970-201ENSMUST00000175582 82 ntBASIC26.2■■□□□ 1.78
Lbx1P52955 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.19■■□□□ 1.78
Lbx1P52955 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.18■■□□□ 1.78
Lbx1P52955 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Lbx1P52955 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lbx1P52955 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lbx1P52955 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.15■■□□□ 1.78
Lbx1P52955 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.13■■□□□ 1.77
Lbx1P52955 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Lbx1P52955 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.1■■□□□ 1.77
Lbx1P52955 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Lbx1P52955 Psd-208ENSMUST00000224556 2034 ntBASIC26.04■■□□□ 1.76
Lbx1P52955 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Lbx1P52955 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.01■■□□□ 1.75
Lbx1P52955 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
Lbx1P52955 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Lbx1P52955 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Lbx1P52955 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Lbx1P52955 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.97■■□□□ 1.75
Lbx1P52955 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.96■■□□□ 1.75
Lbx1P52955 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lbx1P52955 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lbx1P52955 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Lbx1P52955 Mir6538-201ENSMUST00000183713 110 ntBASIC25.91■■□□□ 1.74
Lbx1P52955 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lbx1P52955 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.9■■□□□ 1.74
Lbx1P52955 Cap2-205ENSMUST00000225824 1634 ntBASIC25.89■■□□□ 1.74
Lbx1P52955 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.89■■□□□ 1.74
Lbx1P52955 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.88■■□□□ 1.73
Lbx1P52955 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.87■■□□□ 1.73
Lbx1P52955 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Lbx1P52955 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Lbx1P52955 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Lbx1P52955 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Lbx1P52955 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Lbx1P52955 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Lbx1P52955 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Lbx1P52955 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Lbx1P52955 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.78■■□□□ 1.72
Lbx1P52955 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.77■■□□□ 1.72
Lbx1P52955 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.75■■□□□ 1.71
Lbx1P52955 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Lbx1P52955 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lbx1P52955 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.74■■□□□ 1.71
Lbx1P52955 Gm7432-201ENSMUST00000210343 879 ntBASIC25.74■■□□□ 1.71
Lbx1P52955 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Lbx1P52955 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
Lbx1P52955 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Lbx1P52955 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Lbx1P52955 Gm11175-201ENSMUST00000116172 543 ntBASIC25.72■■□□□ 1.71
Lbx1P52955 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Lbx1P52955 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Lbx1P52955 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Lbx1P52955 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.71■■□□□ 1.71
Lbx1P52955 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Lbx1P52955 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.67■■□□□ 1.7
Lbx1P52955 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Lbx1P52955 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.66■■□□□ 1.7
Lbx1P52955 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Lbx1P52955 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms