Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl1P10146 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl1P10146 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl1P10146 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl1P10146 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccl1P10146 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccl1P10146 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl1P10146 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccl1P10146 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccl1P10146 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccl1P10146 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl1P10146 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccl1P10146 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccl1P10146 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl1P10146 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccl1P10146 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl1P10146 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccl1P10146 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl1P10146 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl1P10146 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl1P10146 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl1P10146 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl1P10146 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl1P10146 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl1P10146 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Ccl1P10146 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl1P10146 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccl1P10146 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl1P10146 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl1P10146 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.82■□□□□ 0.76
Ccl1P10146 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl1P10146 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl1P10146 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl1P10146 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl1P10146 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Ccl1P10146 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl1P10146 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl1P10146 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccl1P10146 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl1P10146 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl1P10146 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl1P10146 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccl1P10146 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccl1P10146 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl1P10146 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccl1P10146 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl1P10146 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl1P10146 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl1P10146 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl1P10146 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccl1P10146 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl1P10146 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl1P10146 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccl1P10146 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl1P10146 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccl1P10146 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl1P10146 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl1P10146 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccl1P10146 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccl1P10146 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccl1P10146 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl1P10146 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl1P10146 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl1P10146 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl1P10146 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl1P10146 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl1P10146 Amer2-203ENSMUST00000225247 2662 ntBASIC19.66■□□□□ 0.74
Ccl1P10146 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccl1P10146 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ccl1P10146 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ccl1P10146 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccl1P10146 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl1P10146 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl1P10146 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl1P10146 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl1P10146 Gm25238-201ENSMUST00000174914 89 ntBASIC19.6■□□□□ 0.73
Ccl1P10146 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl1P10146 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccl1P10146 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccl1P10146 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Ccl1P10146 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl1P10146 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl1P10146 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ccl1P10146 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl1P10146 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl1P10146 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl1P10146 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl1P10146 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccl1P10146 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccl1P10146 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl1P10146 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl1P10146 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl1P10146 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl1P10146 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccl1P10146 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl1P10146 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccl1P10146 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.47■□□□□ 0.71
Ccl1P10146 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.47■□□□□ 0.71
Ccl1P10146 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl1P10146 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms