Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Sema3fO88632 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.85■■■□□ 2.53
Sema3fO88632 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Sema3fO88632 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Sema3fO88632 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Sema3fO88632 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sema3fO88632 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Sema3fO88632 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Sema3fO88632 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Sema3fO88632 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Sema3fO88632 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Sema3fO88632 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.76■■■□□ 2.51
Sema3fO88632 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sema3fO88632 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sema3fO88632 Gm16148-201ENSMUST00000119653 893 ntBASIC30.75■■■□□ 2.51
Sema3fO88632 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Sema3fO88632 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sema3fO88632 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Sema3fO88632 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Sema3fO88632 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.68■■■□□ 2.5
Sema3fO88632 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.67■■■□□ 2.5
Sema3fO88632 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Sema3fO88632 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sema3fO88632 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.66■■■□□ 2.5
Sema3fO88632 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Sema3fO88632 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Sema3fO88632 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sema3fO88632 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Sema3fO88632 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Sema3fO88632 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Sema3fO88632 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Sema3fO88632 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Sema3fO88632 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Sema3fO88632 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.44■■■□□ 2.46
Sema3fO88632 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Sema3fO88632 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Sema3fO88632 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Sema3fO88632 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Sema3fO88632 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sema3fO88632 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Sema3fO88632 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Sema3fO88632 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Sema3fO88632 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.39■■■□□ 2.46
Sema3fO88632 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Sema3fO88632 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Sema3fO88632 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
Sema3fO88632 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Sema3fO88632 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.29■■■□□ 2.44
Sema3fO88632 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.29■■■□□ 2.44
Sema3fO88632 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.28■■■□□ 2.44
Sema3fO88632 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Sema3fO88632 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.27■■■□□ 2.44
Sema3fO88632 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Sema3fO88632 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Sema3fO88632 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Sema3fO88632 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Sema3fO88632 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Sema3fO88632 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Sema3fO88632 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Sema3fO88632 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
Sema3fO88632 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Sema3fO88632 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.21■■■□□ 2.43
Sema3fO88632 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Sema3fO88632 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Sema3fO88632 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Sema3fO88632 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Sema3fO88632 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Sema3fO88632 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.14■■■□□ 2.42
Sema3fO88632 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Sema3fO88632 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.11■■■□□ 2.41
Sema3fO88632 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Sema3fO88632 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sema3fO88632 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Sema3fO88632 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Sema3fO88632 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.06■■■□□ 2.4
Sema3fO88632 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
Sema3fO88632 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Sema3fO88632 Gm45855-201ENSMUST00000212546 880 ntBASIC30.02■■■□□ 2.4
Sema3fO88632 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Sema3fO88632 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Sema3fO88632 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Sema3fO88632 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30■■■□□ 2.39
Sema3fO88632 Gm9397-201ENSMUST00000200125 605 ntBASIC29.99■■■□□ 2.39
Sema3fO88632 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Sema3fO88632 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.98■■■□□ 2.39
Sema3fO88632 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sema3fO88632 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Sema3fO88632 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Sema3fO88632 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.95■■■□□ 2.39
Sema3fO88632 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.92■■■□□ 2.38
Sema3fO88632 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.92■■■□□ 2.38
Sema3fO88632 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Sema3fO88632 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Sema3fO88632 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.91■■■□□ 2.38
Sema3fO88632 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sema3fO88632 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sema3fO88632 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Sema3fO88632 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
Sema3fO88632 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
Sema3fO88632 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms