Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Becn1O88597 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.39■■■□□ 2.3
Becn1O88597 Rab21-202ENSMUST00000218831 843 ntBASIC29.38■■■□□ 2.29
Becn1O88597 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Becn1O88597 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.35■■■□□ 2.29
Becn1O88597 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Becn1O88597 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Becn1O88597 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Becn1O88597 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Becn1O88597 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Becn1O88597 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC29.31■■■□□ 2.28
Becn1O88597 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.29■■■□□ 2.28
Becn1O88597 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Becn1O88597 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Becn1O88597 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.28■■■□□ 2.28
Becn1O88597 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Becn1O88597 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Becn1O88597 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.25■■■□□ 2.27
Becn1O88597 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Becn1O88597 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Becn1O88597 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Becn1O88597 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Becn1O88597 Gm25262-201ENSMUST00000174934 133 ntBASIC29.21■■■□□ 2.27
Becn1O88597 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Becn1O88597 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Becn1O88597 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
Becn1O88597 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Becn1O88597 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Becn1O88597 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Becn1O88597 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Becn1O88597 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Becn1O88597 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.09■■■□□ 2.25
Becn1O88597 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Becn1O88597 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Becn1O88597 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Becn1O88597 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Becn1O88597 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Becn1O88597 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Becn1O88597 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Becn1O88597 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
Becn1O88597 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Becn1O88597 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Becn1O88597 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Becn1O88597 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
Becn1O88597 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Becn1O88597 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29■■■□□ 2.23
Becn1O88597 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29■■■□□ 2.23
Becn1O88597 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Becn1O88597 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.95■■■□□ 2.22
Becn1O88597 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Becn1O88597 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Becn1O88597 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Becn1O88597 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Becn1O88597 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Becn1O88597 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Becn1O88597 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Becn1O88597 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Becn1O88597 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Becn1O88597 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Becn1O88597 Amer2-203ENSMUST00000225247 2662 ntBASIC28.84■■■□□ 2.21
Becn1O88597 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Becn1O88597 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
Becn1O88597 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.82■■■□□ 2.2
Becn1O88597 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Becn1O88597 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.8■■■□□ 2.2
Becn1O88597 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Becn1O88597 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Becn1O88597 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Becn1O88597 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Becn1O88597 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Becn1O88597 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Becn1O88597 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Becn1O88597 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Becn1O88597 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Becn1O88597 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Becn1O88597 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.74■■■□□ 2.19
Becn1O88597 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Becn1O88597 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.73■■■□□ 2.19
Becn1O88597 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Becn1O88597 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.71■■■□□ 2.19
Becn1O88597 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.71■■■□□ 2.19
Becn1O88597 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.7■■■□□ 2.18
Becn1O88597 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
Becn1O88597 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.7■■■□□ 2.18
Becn1O88597 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Becn1O88597 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
Becn1O88597 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Becn1O88597 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Becn1O88597 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Becn1O88597 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Becn1O88597 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Becn1O88597 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Becn1O88597 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Becn1O88597 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Becn1O88597 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Becn1O88597 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
Becn1O88597 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Becn1O88597 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Becn1O88597 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Becn1O88597 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms