Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lst1O08843 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lst1O08843 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lst1O08843 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lst1O08843 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lst1O08843 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lst1O08843 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lst1O08843 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.35■□□□□ 0.37
Lst1O08843 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lst1O08843 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lst1O08843 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lst1O08843 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lst1O08843 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lst1O08843 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lst1O08843 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lst1O08843 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lst1O08843 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lst1O08843 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lst1O08843 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lst1O08843 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lst1O08843 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lst1O08843 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lst1O08843 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lst1O08843 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lst1O08843 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lst1O08843 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.28■□□□□ 0.36
Lst1O08843 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lst1O08843 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Lst1O08843 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lst1O08843 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lst1O08843 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lst1O08843 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Lst1O08843 Gm27325-201ENSMUST00000175467 74 ntBASIC17.25■□□□□ 0.35
Lst1O08843 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.22■□□□□ 0.35
Lst1O08843 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lst1O08843 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lst1O08843 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lst1O08843 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lst1O08843 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lst1O08843 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lst1O08843 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lst1O08843 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lst1O08843 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lst1O08843 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lst1O08843 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lst1O08843 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lst1O08843 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lst1O08843 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lst1O08843 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lst1O08843 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lst1O08843 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lst1O08843 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lst1O08843 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lst1O08843 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lst1O08843 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lst1O08843 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.11■□□□□ 0.33
Lst1O08843 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.11■□□□□ 0.33
Lst1O08843 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lst1O08843 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.09■□□□□ 0.33
Lst1O08843 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lst1O08843 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lst1O08843 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lst1O08843 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lst1O08843 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lst1O08843 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Lst1O08843 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lst1O08843 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.06■□□□□ 0.32
Lst1O08843 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lst1O08843 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lst1O08843 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lst1O08843 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lst1O08843 Amer2-203ENSMUST00000225247 2662 ntBASIC17.04■□□□□ 0.32
Lst1O08843 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lst1O08843 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lst1O08843 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lst1O08843 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lst1O08843 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lst1O08843 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lst1O08843 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lst1O08843 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lst1O08843 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lst1O08843 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lst1O08843 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Lst1O08843 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lst1O08843 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lst1O08843 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Lst1O08843 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.97■□□□□ 0.31
Lst1O08843 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Lst1O08843 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lst1O08843 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.95■□□□□ 0.3
Lst1O08843 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Lst1O08843 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lst1O08843 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Lst1O08843 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lst1O08843 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lst1O08843 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.93■□□□□ 0.3
Lst1O08843 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lst1O08843 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lst1O08843 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lst1O08843 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms