Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Cacna1iE9Q7P2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cacna1iE9Q7P2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cacna1iE9Q7P2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.54■■□□□ 1.04
Cacna1iE9Q7P2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1iE9Q7P2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1iE9Q7P2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.51■■□□□ 1.03
Cacna1iE9Q7P2 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.51■■□□□ 1.03
Cacna1iE9Q7P2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1iE9Q7P2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1iE9Q7P2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1iE9Q7P2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1iE9Q7P2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cacna1iE9Q7P2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.46■■□□□ 1.03
Cacna1iE9Q7P2 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.46■■□□□ 1.03
Cacna1iE9Q7P2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacna1iE9Q7P2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cacna1iE9Q7P2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1iE9Q7P2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1iE9Q7P2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1iE9Q7P2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1iE9Q7P2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cacna1iE9Q7P2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cacna1iE9Q7P2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cacna1iE9Q7P2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1iE9Q7P2 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.36■■□□□ 1.01
Cacna1iE9Q7P2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1iE9Q7P2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1iE9Q7P2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cacna1iE9Q7P2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cacna1iE9Q7P2 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.35■■□□□ 1.01
Cacna1iE9Q7P2 Gm16148-201ENSMUST00000119653 893 ntBASIC21.34■■□□□ 1.01
Cacna1iE9Q7P2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacna1iE9Q7P2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Cacna1iE9Q7P2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.31■■□□□ 1
Cacna1iE9Q7P2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cacna1iE9Q7P2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1iE9Q7P2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1iE9Q7P2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1iE9Q7P2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cacna1iE9Q7P2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cacna1iE9Q7P2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.29■■□□□ 1
Cacna1iE9Q7P2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cacna1iE9Q7P2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cacna1iE9Q7P2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.25■□□□□ 0.99
Cacna1iE9Q7P2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1iE9Q7P2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1iE9Q7P2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1iE9Q7P2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Cacna1iE9Q7P2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cacna1iE9Q7P2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.21■□□□□ 0.99
Cacna1iE9Q7P2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cacna1iE9Q7P2 Gm45855-201ENSMUST00000212546 880 ntBASIC21.2■□□□□ 0.98
Cacna1iE9Q7P2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1iE9Q7P2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.19■□□□□ 0.98
Cacna1iE9Q7P2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1iE9Q7P2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1iE9Q7P2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cacna1iE9Q7P2 Mipep-204ENSMUST00000225043 1548 ntBASIC21.16■□□□□ 0.98
Cacna1iE9Q7P2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1iE9Q7P2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.15■□□□□ 0.98
Cacna1iE9Q7P2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1iE9Q7P2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1iE9Q7P2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.13■□□□□ 0.97
Cacna1iE9Q7P2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1iE9Q7P2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1iE9Q7P2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cacna1iE9Q7P2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1iE9Q7P2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.11■□□□□ 0.97
Cacna1iE9Q7P2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1iE9Q7P2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.1■□□□□ 0.97
Cacna1iE9Q7P2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1iE9Q7P2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1iE9Q7P2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1iE9Q7P2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1iE9Q7P2 Peli2-204ENSMUST00000226513 1320 ntBASIC21.02■□□□□ 0.96
Cacna1iE9Q7P2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cacna1iE9Q7P2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21■□□□□ 0.95
Cacna1iE9Q7P2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cacna1iE9Q7P2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1iE9Q7P2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1iE9Q7P2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1iE9Q7P2 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.99■□□□□ 0.95
Cacna1iE9Q7P2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1iE9Q7P2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1iE9Q7P2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1iE9Q7P2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1iE9Q7P2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1iE9Q7P2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cacna1iE9Q7P2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1iE9Q7P2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1iE9Q7P2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1iE9Q7P2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1iE9Q7P2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1iE9Q7P2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1iE9Q7P2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.91■□□□□ 0.94
Cacna1iE9Q7P2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacna1iE9Q7P2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacna1iE9Q7P2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacna1iE9Q7P2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms