Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp27D3YV89 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Mmp27D3YV89 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mmp27D3YV89 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mmp27D3YV89 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mmp27D3YV89 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mmp27D3YV89 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Mmp27D3YV89 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Mmp27D3YV89 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mmp27D3YV89 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mmp27D3YV89 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Mmp27D3YV89 Gm8109-201ENSMUST00000194076 746 ntBASIC21.55■■□□□ 1.04
Mmp27D3YV89 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mmp27D3YV89 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.53■■□□□ 1.04
Mmp27D3YV89 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp27D3YV89 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp27D3YV89 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
Mmp27D3YV89 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp27D3YV89 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp27D3YV89 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp27D3YV89 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp27D3YV89 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp27D3YV89 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp27D3YV89 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp27D3YV89 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp27D3YV89 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp27D3YV89 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.42■■□□□ 1.02
Mmp27D3YV89 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp27D3YV89 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Mmp27D3YV89 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Mmp27D3YV89 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.4■■□□□ 1.02
Mmp27D3YV89 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.39■■□□□ 1.01
Mmp27D3YV89 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp27D3YV89 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp27D3YV89 Gm27322-201ENSMUST00000184007 104 ntBASIC21.38■■□□□ 1.01
Mmp27D3YV89 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Mmp27D3YV89 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Mmp27D3YV89 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Mmp27D3YV89 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Mmp27D3YV89 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.32■■□□□ 1
Mmp27D3YV89 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
Mmp27D3YV89 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp27D3YV89 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp27D3YV89 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp27D3YV89 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp27D3YV89 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Mmp27D3YV89 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.28■■□□□ 1
Mmp27D3YV89 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp27D3YV89 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp27D3YV89 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp27D3YV89 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.22■□□□□ 0.99
Mmp27D3YV89 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.22■□□□□ 0.99
Mmp27D3YV89 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Mmp27D3YV89 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp27D3YV89 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp27D3YV89 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mmp27D3YV89 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Mmp27D3YV89 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp27D3YV89 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp27D3YV89 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp27D3YV89 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Mmp27D3YV89 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp27D3YV89 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp27D3YV89 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp27D3YV89 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp27D3YV89 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp27D3YV89 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.15■□□□□ 0.98
Mmp27D3YV89 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mmp27D3YV89 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.14■□□□□ 0.97
Mmp27D3YV89 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp27D3YV89 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp27D3YV89 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp27D3YV89 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp27D3YV89 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp27D3YV89 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp27D3YV89 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp27D3YV89 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp27D3YV89 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp27D3YV89 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp27D3YV89 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Mmp27D3YV89 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Mmp27D3YV89 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp27D3YV89 AC166822.3-201ENSMUST00000227394 661 ntBASIC21■□□□□ 0.95
Mmp27D3YV89 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp27D3YV89 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp27D3YV89 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms