Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pramef20B1ARV6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pramef20B1ARV6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pramef20B1ARV6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pramef20B1ARV6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Pramef20B1ARV6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pramef20B1ARV6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Pramef20B1ARV6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pramef20B1ARV6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pramef20B1ARV6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pramef20B1ARV6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.37■■□□□ 1.65
Pramef20B1ARV6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.35■■□□□ 1.65
Pramef20B1ARV6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pramef20B1ARV6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Pramef20B1ARV6 Gm16148-201ENSMUST00000119653 893 ntBASIC25.32■■□□□ 1.64
Pramef20B1ARV6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Pramef20B1ARV6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pramef20B1ARV6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.3■■□□□ 1.64
Pramef20B1ARV6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pramef20B1ARV6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pramef20B1ARV6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pramef20B1ARV6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pramef20B1ARV6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Pramef20B1ARV6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pramef20B1ARV6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pramef20B1ARV6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pramef20B1ARV6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pramef20B1ARV6 Peli2-204ENSMUST00000226513 1320 ntBASIC25.21■■□□□ 1.63
Pramef20B1ARV6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pramef20B1ARV6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pramef20B1ARV6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pramef20B1ARV6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Pramef20B1ARV6 Mipep-204ENSMUST00000225043 1548 ntBASIC25.17■■□□□ 1.62
Pramef20B1ARV6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pramef20B1ARV6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.14■■□□□ 1.61
Pramef20B1ARV6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pramef20B1ARV6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.13■■□□□ 1.61
Pramef20B1ARV6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pramef20B1ARV6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Pramef20B1ARV6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Pramef20B1ARV6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pramef20B1ARV6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Pramef20B1ARV6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pramef20B1ARV6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pramef20B1ARV6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pramef20B1ARV6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.06■■□□□ 1.6
Pramef20B1ARV6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Pramef20B1ARV6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pramef20B1ARV6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pramef20B1ARV6 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.01■■□□□ 1.59
Pramef20B1ARV6 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.01■■□□□ 1.59
Pramef20B1ARV6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pramef20B1ARV6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25■■□□□ 1.59
Pramef20B1ARV6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pramef20B1ARV6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pramef20B1ARV6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.97■■□□□ 1.59
Pramef20B1ARV6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Pramef20B1ARV6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pramef20B1ARV6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pramef20B1ARV6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pramef20B1ARV6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.93■■□□□ 1.58
Pramef20B1ARV6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.93■■□□□ 1.58
Pramef20B1ARV6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pramef20B1ARV6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pramef20B1ARV6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pramef20B1ARV6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pramef20B1ARV6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pramef20B1ARV6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.91■■□□□ 1.58
Pramef20B1ARV6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pramef20B1ARV6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pramef20B1ARV6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pramef20B1ARV6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.88■■□□□ 1.57
Pramef20B1ARV6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pramef20B1ARV6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pramef20B1ARV6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pramef20B1ARV6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pramef20B1ARV6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pramef20B1ARV6 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.79■■□□□ 1.56
Pramef20B1ARV6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pramef20B1ARV6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.79■■□□□ 1.56
Pramef20B1ARV6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.79■■□□□ 1.56
Pramef20B1ARV6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.79■■□□□ 1.56
Pramef20B1ARV6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Pramef20B1ARV6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pramef20B1ARV6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pramef20B1ARV6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pramef20B1ARV6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pramef20B1ARV6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Pramef20B1ARV6 Gm45855-201ENSMUST00000212546 880 ntBASIC24.73■■□□□ 1.55
Pramef20B1ARV6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pramef20B1ARV6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pramef20B1ARV6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pramef20B1ARV6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pramef20B1ARV6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pramef20B1ARV6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pramef20B1ARV6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pramef20B1ARV6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.66■■□□□ 1.54
Pramef20B1ARV6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Pramef20B1ARV6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pramef20B1ARV6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms