Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubr4A2AN08 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubr4A2AN08 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubr4A2AN08 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.99□□□□□ -0.01
Ubr4A2AN08 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubr4A2AN08 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr4A2AN08 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.96□□□□□ -0.01
Ubr4A2AN08 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.94□□□□□ -0.02
Ubr4A2AN08 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr4A2AN08 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.92□□□□□ -0.02
Ubr4A2AN08 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ubr4A2AN08 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.91□□□□□ -0.02
Ubr4A2AN08 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Ubr4A2AN08 Gm6821-201ENSMUST00000107540 542 ntBASIC14.88□□□□□ -0.03
Ubr4A2AN08 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ubr4A2AN08 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr4A2AN08 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.86□□□□□ -0.03
Ubr4A2AN08 Mir6538-201ENSMUST00000183713 110 ntBASIC14.85□□□□□ -0.03
Ubr4A2AN08 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr4A2AN08 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr4A2AN08 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr4A2AN08 Peli2-204ENSMUST00000226513 1320 ntBASIC14.83□□□□□ -0.03
Ubr4A2AN08 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr4A2AN08 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr4A2AN08 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ubr4A2AN08 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr4A2AN08 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ubr4A2AN08 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC14.78□□□□□ -0.04
Ubr4A2AN08 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.78□□□□□ -0.04
Ubr4A2AN08 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.77□□□□□ -0.05
Ubr4A2AN08 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr4A2AN08 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr4A2AN08 Gm24970-201ENSMUST00000175582 82 ntBASIC14.74□□□□□ -0.05
Ubr4A2AN08 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr4A2AN08 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Ubr4A2AN08 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.73□□□□□ -0.05
Ubr4A2AN08 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.72□□□□□ -0.05
Ubr4A2AN08 AL845457.1-201ENSMUST00000197244 68 ntBASIC14.72□□□□□ -0.05
Ubr4A2AN08 Gm11175-201ENSMUST00000116172 543 ntBASIC14.69□□□□□ -0.06
Ubr4A2AN08 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr4A2AN08 Cap2-205ENSMUST00000225824 1634 ntBASIC14.69□□□□□ -0.06
Ubr4A2AN08 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ubr4A2AN08 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr4A2AN08 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr4A2AN08 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.65□□□□□ -0.06
Ubr4A2AN08 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr4A2AN08 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr4A2AN08 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr4A2AN08 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr4A2AN08 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr4A2AN08 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr4A2AN08 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr4A2AN08 Gm22567-201ENSMUST00000175542 342 ntBASIC14.62□□□□□ -0.07
Ubr4A2AN08 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr4A2AN08 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ubr4A2AN08 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.59□□□□□ -0.07
Ubr4A2AN08 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr4A2AN08 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Ubr4A2AN08 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr4A2AN08 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr4A2AN08 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr4A2AN08 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr4A2AN08 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.53□□□□□ -0.08
Ubr4A2AN08 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr4A2AN08 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr4A2AN08 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr4A2AN08 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Ubr4A2AN08 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ubr4A2AN08 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ubr4A2AN08 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ubr4A2AN08 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ubr4A2AN08 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.49□□□□□ -0.09
Ubr4A2AN08 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ubr4A2AN08 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ubr4A2AN08 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr4A2AN08 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr4A2AN08 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
Ubr4A2AN08 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr4A2AN08 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr4A2AN08 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.46□□□□□ -0.09
Ubr4A2AN08 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr4A2AN08 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr4A2AN08 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubr4A2AN08 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr4A2AN08 Gm7432-201ENSMUST00000210343 879 ntBASIC14.41□□□□□ -0.1
Ubr4A2AN08 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.41□□□□□ -0.1
Ubr4A2AN08 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ubr4A2AN08 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubr4A2AN08 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr4A2AN08 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubr4A2AN08 Serp2-204ENSMUST00000228055 705 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms