Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav12d-1A0N8R0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav12d-1A0N8R0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav12d-1A0N8R0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav12d-1A0N8R0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav12d-1A0N8R0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav12d-1A0N8R0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav12d-1A0N8R0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.94■□□□□ 0.94
Trav12d-1A0N8R0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav12d-1A0N8R0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trav12d-1A0N8R0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav12d-1A0N8R0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav12d-1A0N8R0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trav12d-1A0N8R0 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.92■□□□□ 0.94
Trav12d-1A0N8R0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav12d-1A0N8R0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav12d-1A0N8R0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav12d-1A0N8R0 Mipep-204ENSMUST00000225043 1548 ntBASIC20.89■□□□□ 0.94
Trav12d-1A0N8R0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trav12d-1A0N8R0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.86■□□□□ 0.93
Trav12d-1A0N8R0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav12d-1A0N8R0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav12d-1A0N8R0 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.85■□□□□ 0.93
Trav12d-1A0N8R0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav12d-1A0N8R0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trav12d-1A0N8R0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav12d-1A0N8R0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav12d-1A0N8R0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav12d-1A0N8R0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav12d-1A0N8R0 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.82■□□□□ 0.92
Trav12d-1A0N8R0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Trav12d-1A0N8R0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trav12d-1A0N8R0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav12d-1A0N8R0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav12d-1A0N8R0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.79■□□□□ 0.92
Trav12d-1A0N8R0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav12d-1A0N8R0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav12d-1A0N8R0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav12d-1A0N8R0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trav12d-1A0N8R0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav12d-1A0N8R0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12d-1A0N8R0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12d-1A0N8R0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav12d-1A0N8R0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav12d-1A0N8R0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav12d-1A0N8R0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
Trav12d-1A0N8R0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav12d-1A0N8R0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav12d-1A0N8R0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav12d-1A0N8R0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trav12d-1A0N8R0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav12d-1A0N8R0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav12d-1A0N8R0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12d-1A0N8R0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12d-1A0N8R0 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.65■□□□□ 0.9
Trav12d-1A0N8R0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Trav12d-1A0N8R0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav12d-1A0N8R0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav12d-1A0N8R0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trav12d-1A0N8R0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav12d-1A0N8R0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav12d-1A0N8R0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav12d-1A0N8R0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Trav12d-1A0N8R0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav12d-1A0N8R0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav12d-1A0N8R0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12d-1A0N8R0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12d-1A0N8R0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav12d-1A0N8R0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav12d-1A0N8R0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav12d-1A0N8R0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12d-1A0N8R0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Trav12d-1A0N8R0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12d-1A0N8R0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12d-1A0N8R0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12d-1A0N8R0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav12d-1A0N8R0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trav12d-1A0N8R0 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.46■□□□□ 0.87
Trav12d-1A0N8R0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12d-1A0N8R0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Trav12d-1A0N8R0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12d-1A0N8R0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav12d-1A0N8R0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav12d-1A0N8R0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav12d-1A0N8R0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12d-1A0N8R0 Gm25262-201ENSMUST00000174934 133 ntBASIC20.41■□□□□ 0.86
Trav12d-1A0N8R0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav12d-1A0N8R0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12d-1A0N8R0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.39■□□□□ 0.85
Trav12d-1A0N8R0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12d-1A0N8R0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12d-1A0N8R0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trav12d-1A0N8R0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12d-1A0N8R0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12d-1A0N8R0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12d-1A0N8R0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav12d-1A0N8R0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12d-1A0N8R0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12d-1A0N8R0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12d-1A0N8R0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms