Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv3-4A0A140T8Q4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
Igkv3-4A0A140T8Q4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-4A0A140T8Q4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.15■□□□□ 0.18
Igkv3-4A0A140T8Q4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Igkv3-4A0A140T8Q4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-4A0A140T8Q4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-4A0A140T8Q4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-4A0A140T8Q4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Igkv3-4A0A140T8Q4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-4A0A140T8Q4 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.07■□□□□ 0.16
Igkv3-4A0A140T8Q4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-4A0A140T8Q4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC16.06■□□□□ 0.16
Igkv3-4A0A140T8Q4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-4A0A140T8Q4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-4A0A140T8Q4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-4A0A140T8Q4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv3-4A0A140T8Q4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv3-4A0A140T8Q4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv3-4A0A140T8Q4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Igkv3-4A0A140T8Q4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv3-4A0A140T8Q4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv3-4A0A140T8Q4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv3-4A0A140T8Q4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-4A0A140T8Q4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-4A0A140T8Q4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-4A0A140T8Q4 Zxda-201ENSMUST00000117281 2621 ntBASIC16■□□□□ 0.15
Igkv3-4A0A140T8Q4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv3-4A0A140T8Q4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-4A0A140T8Q4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15.99■□□□□ 0.15
Igkv3-4A0A140T8Q4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Igkv3-4A0A140T8Q4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-4A0A140T8Q4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-4A0A140T8Q4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-4A0A140T8Q4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv3-4A0A140T8Q4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Igkv3-4A0A140T8Q4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC15.96■□□□□ 0.15
Igkv3-4A0A140T8Q4 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.95■□□□□ 0.14
Igkv3-4A0A140T8Q4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv3-4A0A140T8Q4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv3-4A0A140T8Q4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv3-4A0A140T8Q4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv3-4A0A140T8Q4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv3-4A0A140T8Q4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv3-4A0A140T8Q4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv3-4A0A140T8Q4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv3-4A0A140T8Q4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv3-4A0A140T8Q4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC15.89■□□□□ 0.13
Igkv3-4A0A140T8Q4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv3-4A0A140T8Q4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-4A0A140T8Q4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-4A0A140T8Q4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC15.87■□□□□ 0.13
Igkv3-4A0A140T8Q4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv3-4A0A140T8Q4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv3-4A0A140T8Q4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv3-4A0A140T8Q4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15.84■□□□□ 0.13
Igkv3-4A0A140T8Q4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv3-4A0A140T8Q4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.84■□□□□ 0.13
Igkv3-4A0A140T8Q4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Igkv3-4A0A140T8Q4 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.83■□□□□ 0.13
Igkv3-4A0A140T8Q4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv3-4A0A140T8Q4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-4A0A140T8Q4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-4A0A140T8Q4 Rab21-202ENSMUST00000218831 843 ntBASIC15.82■□□□□ 0.12
Igkv3-4A0A140T8Q4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-4A0A140T8Q4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-4A0A140T8Q4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv3-4A0A140T8Q4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Igkv3-4A0A140T8Q4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv3-4A0A140T8Q4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv3-4A0A140T8Q4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-4A0A140T8Q4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-4A0A140T8Q4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-4A0A140T8Q4 Zfp131-207ENSMUST00000224946 1783 ntBASIC15.8■□□□□ 0.12
Igkv3-4A0A140T8Q4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-4A0A140T8Q4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv3-4A0A140T8Q4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC15.79■□□□□ 0.12
Igkv3-4A0A140T8Q4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-4A0A140T8Q4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-4A0A140T8Q4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-4A0A140T8Q4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-4A0A140T8Q4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Igkv3-4A0A140T8Q4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv3-4A0A140T8Q4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv3-4A0A140T8Q4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Igkv3-4A0A140T8Q4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv3-4A0A140T8Q4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Igkv3-4A0A140T8Q4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Igkv3-4A0A140T8Q4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv3-4A0A140T8Q4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv3-4A0A140T8Q4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv3-4A0A140T8Q4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv3-4A0A140T8Q4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms