Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav3n-3A0A0G2JEM0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav3n-3A0A0G2JEM0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav3n-3A0A0G2JEM0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.28■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav3n-3A0A0G2JEM0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav3n-3A0A0G2JEM0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.2■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.17■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav3n-3A0A0G2JEM0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Rab21-202ENSMUST00000218831 843 ntBASIC19.12■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav3n-3A0A0G2JEM0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.04■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.02■□□□□ 0.64
Trav3n-3A0A0G2JEM0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav3n-3A0A0G2JEM0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav3n-3A0A0G2JEM0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav3n-3A0A0G2JEM0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav3n-3A0A0G2JEM0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav3n-3A0A0G2JEM0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav3n-3A0A0G2JEM0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav3n-3A0A0G2JEM0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.93■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.9■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav3n-3A0A0G2JEM0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trav3n-3A0A0G2JEM0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms