Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.56■■■□□ 2
Igkv16-104A0A0B4J1I1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Igkv16-104A0A0B4J1I1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.55■■■□□ 2
Igkv16-104A0A0B4J1I1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.54■■■□□ 2
Igkv16-104A0A0B4J1I1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Igkv16-104A0A0B4J1I1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Igkv16-104A0A0B4J1I1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.54■■■□□ 2
Igkv16-104A0A0B4J1I1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Igkv16-104A0A0B4J1I1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.5■■□□□ 1.99
Igkv16-104A0A0B4J1I1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Igkv16-104A0A0B4J1I1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Igkv16-104A0A0B4J1I1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Igkv16-104A0A0B4J1I1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Igkv16-104A0A0B4J1I1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.45■■□□□ 1.98
Igkv16-104A0A0B4J1I1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.43■■□□□ 1.98
Igkv16-104A0A0B4J1I1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Igkv16-104A0A0B4J1I1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Igkv16-104A0A0B4J1I1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Igkv16-104A0A0B4J1I1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.39■■□□□ 1.98
Igkv16-104A0A0B4J1I1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.38■■□□□ 1.97
Igkv16-104A0A0B4J1I1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.38■■□□□ 1.97
Igkv16-104A0A0B4J1I1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Igkv16-104A0A0B4J1I1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Igkv16-104A0A0B4J1I1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Igkv16-104A0A0B4J1I1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.29■■□□□ 1.96
Igkv16-104A0A0B4J1I1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Igkv16-104A0A0B4J1I1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.26■■□□□ 1.96
Igkv16-104A0A0B4J1I1 Gm45855-201ENSMUST00000212546 880 ntBASIC27.24■■□□□ 1.95
Igkv16-104A0A0B4J1I1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Igkv16-104A0A0B4J1I1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Igkv16-104A0A0B4J1I1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.22■■□□□ 1.95
Igkv16-104A0A0B4J1I1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Igkv16-104A0A0B4J1I1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Igkv16-104A0A0B4J1I1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Igkv16-104A0A0B4J1I1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Igkv16-104A0A0B4J1I1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Igkv16-104A0A0B4J1I1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Igkv16-104A0A0B4J1I1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Igkv16-104A0A0B4J1I1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Igkv16-104A0A0B4J1I1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.13■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Igkv16-104A0A0B4J1I1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Gm9397-201ENSMUST00000200125 605 ntBASIC27.1■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.1■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Igkv16-104A0A0B4J1I1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Igkv16-104A0A0B4J1I1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Igkv16-104A0A0B4J1I1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Igkv16-104A0A0B4J1I1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Igkv16-104A0A0B4J1I1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.92
Igkv16-104A0A0B4J1I1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Igkv16-104A0A0B4J1I1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27■■□□□ 1.91
Igkv16-104A0A0B4J1I1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.99■■□□□ 1.91
Igkv16-104A0A0B4J1I1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Igkv16-104A0A0B4J1I1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.97■■□□□ 1.91
Igkv16-104A0A0B4J1I1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Igkv16-104A0A0B4J1I1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.96■■□□□ 1.91
Igkv16-104A0A0B4J1I1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Igkv16-104A0A0B4J1I1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.93■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Igkv16-104A0A0B4J1I1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
Igkv16-104A0A0B4J1I1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Igkv16-104A0A0B4J1I1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Igkv16-104A0A0B4J1I1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.87■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Igkv16-104A0A0B4J1I1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.83■■□□□ 1.89
Igkv16-104A0A0B4J1I1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.83■■□□□ 1.89
Igkv16-104A0A0B4J1I1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Igkv16-104A0A0B4J1I1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Igkv16-104A0A0B4J1I1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Igkv16-104A0A0B4J1I1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Igkv16-104A0A0B4J1I1 Gm24970-201ENSMUST00000175582 82 ntBASIC26.77■■□□□ 1.88
Igkv16-104A0A0B4J1I1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.75■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Igkv16-104A0A0B4J1I1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.71■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Igkv16-104A0A0B4J1I1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Igkv16-104A0A0B4J1I1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms