Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav4-2A0A075B638 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.63■□□□□ 0.89
Trav4-2A0A075B638 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trav4-2A0A075B638 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav4-2A0A075B638 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav4-2A0A075B638 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav4-2A0A075B638 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trav4-2A0A075B638 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav4-2A0A075B638 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav4-2A0A075B638 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.59■□□□□ 0.89
Trav4-2A0A075B638 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav4-2A0A075B638 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav4-2A0A075B638 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav4-2A0A075B638 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav4-2A0A075B638 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav4-2A0A075B638 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav4-2A0A075B638 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav4-2A0A075B638 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav4-2A0A075B638 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav4-2A0A075B638 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav4-2A0A075B638 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-2A0A075B638 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-2A0A075B638 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-2A0A075B638 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav4-2A0A075B638 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Trav4-2A0A075B638 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav4-2A0A075B638 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trav4-2A0A075B638 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.49■□□□□ 0.87
Trav4-2A0A075B638 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav4-2A0A075B638 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav4-2A0A075B638 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav4-2A0A075B638 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav4-2A0A075B638 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trav4-2A0A075B638 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav4-2A0A075B638 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Trav4-2A0A075B638 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trav4-2A0A075B638 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav4-2A0A075B638 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav4-2A0A075B638 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav4-2A0A075B638 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav4-2A0A075B638 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav4-2A0A075B638 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav4-2A0A075B638 Gm25238-201ENSMUST00000174914 89 ntBASIC20.4■□□□□ 0.86
Trav4-2A0A075B638 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav4-2A0A075B638 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav4-2A0A075B638 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-2A0A075B638 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav4-2A0A075B638 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.35■□□□□ 0.85
Trav4-2A0A075B638 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav4-2A0A075B638 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav4-2A0A075B638 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav4-2A0A075B638 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
Trav4-2A0A075B638 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav4-2A0A075B638 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.33■□□□□ 0.85
Trav4-2A0A075B638 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav4-2A0A075B638 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.29■□□□□ 0.84
Trav4-2A0A075B638 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Trav4-2A0A075B638 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav4-2A0A075B638 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.26■□□□□ 0.83
Trav4-2A0A075B638 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.26■□□□□ 0.83
Trav4-2A0A075B638 Amer2-203ENSMUST00000225247 2662 ntBASIC20.26■□□□□ 0.83
Trav4-2A0A075B638 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav4-2A0A075B638 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav4-2A0A075B638 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trav4-2A0A075B638 Mipep-204ENSMUST00000225043 1548 ntBASIC20.25■□□□□ 0.83
Trav4-2A0A075B638 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav4-2A0A075B638 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav4-2A0A075B638 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-2A0A075B638 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-2A0A075B638 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-2A0A075B638 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-2A0A075B638 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-2A0A075B638 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav4-2A0A075B638 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trav4-2A0A075B638 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Trav4-2A0A075B638 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav4-2A0A075B638 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav4-2A0A075B638 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav4-2A0A075B638 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.17■□□□□ 0.82
Trav4-2A0A075B638 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Trav4-2A0A075B638 Rab21-202ENSMUST00000218831 843 ntBASIC20.16■□□□□ 0.82
Trav4-2A0A075B638 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav4-2A0A075B638 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.16■□□□□ 0.82
Trav4-2A0A075B638 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav4-2A0A075B638 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.14■□□□□ 0.81
Trav4-2A0A075B638 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Trav4-2A0A075B638 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trav4-2A0A075B638 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav4-2A0A075B638 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav4-2A0A075B638 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav4-2A0A075B638 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav4-2A0A075B638 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trav4-2A0A075B638 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav4-2A0A075B638 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav4-2A0A075B638 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.07■□□□□ 0.8
Trav4-2A0A075B638 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav4-2A0A075B638 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav4-2A0A075B638 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Trav4-2A0A075B638 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.06■□□□□ 0.8
Trav4-2A0A075B638 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms