Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm12389-201ENSMUST00000117696 418 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm11380-201ENSMUST00000118067 560 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm9673-201ENSMUST00000119287 781 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm13019-201ENSMUST00000120000 276 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm16030-201ENSMUST00000159098 603 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm22119-201ENSMUST00000175594 99 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm9081-201ENSMUST00000182346 991 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Mir6998-201ENSMUST00000183343 64 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm29410-201ENSMUST00000188383 694 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm37852-201ENSMUST00000193027 350 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm37301-201ENSMUST00000195412 568 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm5100-201ENSMUST00000195631 589 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm3726-201ENSMUST00000203110 785 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm44545-201ENSMUST00000208262 746 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.19□□□□□ -0.78
Clrn1Q8K445 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.18□□□□□ -0.78
Clrn1Q8K445 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Clrn1Q8K445 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms