Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 TCAM1P-207ENST00000485295 1537 ntBASIC17.19■□□□□ 0.34
RC3H1Q5TC82 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AP000437.1-201ENST00000624057 2085 ntBASIC17.19■□□□□ 0.34
RC3H1Q5TC82 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC015813.5-201ENST00000624641 1514 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CASP2-203ENST00000392925 616 ntTSL 3 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CACYBPP3-201ENST00000406011 625 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CRIP1P2-201ENST00000425396 228 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 RPL18AP15-201ENST00000430258 517 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC120057.1-201ENST00000483947 663 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 HNRNPA1P4-201ENST00000509706 756 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 IGHVII-33-1-201ENST00000524010 280 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC087072.1-201ENST00000603727 421 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AL596257.1-201ENST00000641463 2694 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 AC090643.2-201ENST00000623442 2029 ntBASIC17.18■□□□□ 0.34
RC3H1Q5TC82 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RC3H1Q5TC82 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 DLX4-206ENST00000611342 1662 ntBASIC17.17■□□□□ 0.34
RC3H1Q5TC82 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 IQCF4-203ENST00000428561 420 ntBASIC17.17■□□□□ 0.34
RC3H1Q5TC82 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 AL353622.2-201ENST00000605846 425 ntBASIC17.17■□□□□ 0.34
RC3H1Q5TC82 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 AC117500.5-201ENST00000623233 527 ntBASIC17.17■□□□□ 0.34
RC3H1Q5TC82 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RC3H1Q5TC82 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms