Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CHMP24386 MIR769-201ENST00000390225 118 ntBASIC13.18□□□□□ -0.3
CHMP24386 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.18□□□□□ -0.3
CHMP24386 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.18□□□□□ -0.3
CHMP24386 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 AC006122.1-201ENST00000493323 440 ntBASIC13.18□□□□□ -0.3
CHMP24386 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.18□□□□□ -0.3
CHMP24386 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 SCARNA21-201ENST00000517026 139 ntBASIC13.18□□□□□ -0.3
CHMP24386 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.18□□□□□ -0.3
CHMP24386 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.18□□□□□ -0.3
CHMP24386 AC009779.1-201ENST00000551138 283 ntBASIC13.18□□□□□ -0.3
CHMP24386 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CHMP24386 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.18□□□□□ -0.3
CHMP24386 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHMP24386 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHMP24386 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
CHMP24386 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHMP24386 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CHMP24386 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHMP24386 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 AK2P2-201ENST00000439142 405 ntBASIC13.17□□□□□ -0.3
CHMP24386 AC125604.1-201ENST00000496255 707 ntBASIC13.17□□□□□ -0.3
CHMP24386 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.17□□□□□ -0.3
CHMP24386 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.17□□□□□ -0.3
CHMP24386 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 AL645939.5-201ENST00000606834 243 ntBASIC13.17□□□□□ -0.3
CHMP24386 AC026740.1-201ENST00000607068 791 ntBASIC13.17□□□□□ -0.3
CHMP24386 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHMP24386 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms