Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CCL1P22362 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.03□□□□□ -0.48
CCL1P22362 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCL1P22362 PI4KAP2-201ENST00000360806 2080 ntBASIC12.02□□□□□ -0.48
CCL1P22362 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCL1P22362 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
CCL1P22362 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCL1P22362 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCL1P22362 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCL1P22362 AL445209.1-201ENST00000607269 3491 ntBASIC12.02□□□□□ -0.48
CCL1P22362 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CCL1P22362 AC005562.1-201ENST00000583030 3219 ntBASIC12.02□□□□□ -0.48
CCL1P22362 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCL1P22362 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CCL1P22362 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.02□□□□□ -0.49
CCL1P22362 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.02□□□□□ -0.49
CCL1P22362 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.02□□□□□ -0.49
CCL1P22362 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.02□□□□□ -0.49
CCL1P22362 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.02□□□□□ -0.49
CCL1P22362 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.02□□□□□ -0.49
CCL1P22362 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.02□□□□□ -0.49
CCL1P22362 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CCL1P22362 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.02□□□□□ -0.49
CCL1P22362 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.02□□□□□ -0.49
CCL1P22362 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
CCL1P22362 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCL1P22362 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCL1P22362 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.01□□□□□ -0.49
CCL1P22362 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 AP003969.2-201ENST00000623739 2275 ntBASIC12.01□□□□□ -0.49
CCL1P22362 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.01□□□□□ -0.49
CCL1P22362 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CCL1P22362 LINC00265-2P-201ENST00000413372 782 ntBASIC12.01□□□□□ -0.49
CCL1P22362 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.01□□□□□ -0.49
CCL1P22362 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.01□□□□□ -0.49
CCL1P22362 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.01□□□□□ -0.49
CCL1P22362 AC005722.1-201ENST00000431878 964 ntBASIC12.01□□□□□ -0.49
CCL1P22362 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.01□□□□□ -0.49
CCL1P22362 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.01□□□□□ -0.49
CCL1P22362 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.01□□□□□ -0.49
CCL1P22362 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 AC044849.1-201ENST00000519737 1188 ntBASIC12.01□□□□□ -0.49
CCL1P22362 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.01□□□□□ -0.49
CCL1P22362 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms