Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 GBP1P1-201ENST00000394662 1740 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 HOMER2P2-201ENST00000451621 847 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 GCOM2-201ENST00000509133 1104 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 AP005482.1-201ENST00000563722 1273 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ZACNP1-201ENST00000612259 710 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 AC002472.3-201ENST00000640124 621 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 AC111170.3-201ENST00000624282 2464 ntBASIC13□□□□□ -0.33
TMEM53Q6P2H8 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 AC079776.1-201ENST00000401540 1152 ntBASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 IGHV3-71-201ENST00000523324 359 ntBASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 HILS1-202ENST00000545329 423 ntBASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 MIR6805-201ENST00000615055 62 ntBASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM53Q6P2H8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms