Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm43980-201ENSMUST00000204899 1612 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Tnfrsf1bP25119 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm12389-201ENSMUST00000117696 418 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm11380-201ENSMUST00000118067 560 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm13019-201ENSMUST00000120000 276 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Mir1905-201ENSMUST00000122779 82 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm3793-201ENSMUST00000204973 672 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm5805-201ENSMUST00000072779 456 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gm26226-201ENSMUST00000082509 116 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.1□□□□□ -0.79
Tnfrsf1bP25119 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm26474-201ENSMUST00000116762 122 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms