Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
TOP2AP11388 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC23.53■■□□□ 1.36
TOP2AP11388 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
TOP2AP11388 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
TOP2AP11388 AC010677.1-201ENST00000441690 412 ntBASIC23.53■■□□□ 1.36
TOP2AP11388 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC23.53■■□□□ 1.36
TOP2AP11388 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC23.53■■□□□ 1.36
TOP2AP11388 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC23.53■■□□□ 1.36
TOP2AP11388 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC23.53■■□□□ 1.36
TOP2AP11388 AC012146.4-201ENST00000575546 271 ntBASIC23.53■■□□□ 1.36
TOP2AP11388 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC23.53■■□□□ 1.36
TOP2AP11388 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC23.53■■□□□ 1.36
TOP2AP11388 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC23.53■■□□□ 1.36
TOP2AP11388 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TOP2AP11388 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TOP2AP11388 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TOP2AP11388 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC23.52■■□□□ 1.36
TOP2AP11388 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TOP2AP11388 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC23.52■■□□□ 1.36
TOP2AP11388 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC23.52■■□□□ 1.36
TOP2AP11388 AC108024.1-201ENST00000626286 1721 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 FAM183BP-201ENST00000409072 1595 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TOP2AP11388 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TOP2AP11388 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 OR2T32P-201ENST00000403423 963 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 RPSAP61-201ENST00000412542 878 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 HMGN1P4-201ENST00000419500 290 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 KRT18P63-201ENST00000505463 979 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC23.52■■□□□ 1.36
TOP2AP11388 AC104759.1-201ENST00000559109 939 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 HNRNPA1P11-201ENST00000580106 956 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC23.52■■□□□ 1.36
TOP2AP11388 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TOP2AP11388 AC106881.1-201ENST00000605849 3329 ntBASIC23.52■■□□□ 1.36
TOP2AP11388 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
TOP2AP11388 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.35
TOP2AP11388 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 AC005089.1-201ENST00000619486 2241 ntBASIC23.51■■□□□ 1.35
TOP2AP11388 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TOP2AP11388 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC23.51■■□□□ 1.35
TOP2AP11388 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 WDR54-202ENST00000409791 854 ntTSL 3 BASIC23.51■■□□□ 1.35
TOP2AP11388 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC23.51■■□□□ 1.35
TOP2AP11388 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC23.51■■□□□ 1.35
TOP2AP11388 MST1L-204ENST00000545160 559 ntTSL 4 BASIC23.51■■□□□ 1.35
TOP2AP11388 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC23.51■■□□□ 1.35
TOP2AP11388 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TOP2AP11388 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC23.51■■□□□ 1.35
TOP2AP11388 POM121L4P-202ENST00000427789 1891 ntBASIC23.51■■□□□ 1.35
TOP2AP11388 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
TOP2AP11388 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC23.51■■□□□ 1.35
TOP2AP11388 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC23.51■■□□□ 1.35
TOP2AP11388 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TOP2AP11388 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC23.5■■□□□ 1.35
TOP2AP11388 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
TOP2AP11388 CR383656.2-201ENST00000548656 2254 ntBASIC23.5■■□□□ 1.35
TOP2AP11388 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TOP2AP11388 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 MIR1226-201ENST00000408658 75 ntBASIC23.5■■□□□ 1.35
TOP2AP11388 HNRNPA1P33-201ENST00000421426 561 ntBASIC23.5■■□□□ 1.35
TOP2AP11388 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC23.5■■□□□ 1.35
TOP2AP11388 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC23.5■■□□□ 1.35
TOP2AP11388 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 AC112220.4-201ENST00000604982 1263 ntBASIC23.5■■□□□ 1.35
TOP2AP11388 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC23.5■■□□□ 1.35
TOP2AP11388 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TOP2AP11388 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC23.5■■□□□ 1.35
TOP2AP11388 MANEA-AS1-201ENST00000564541 2268 ntBASIC23.5■■□□□ 1.35
TOP2AP11388 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC23.5■■□□□ 1.35
TOP2AP11388 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms