Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Thumpd1Q99J36 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Thumpd1Q99J36 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm22920-201ENSMUST00000102175 109 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm13809-201ENSMUST00000117921 597 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm15595-201ENSMUST00000120840 961 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm37259-201ENSMUST00000193903 849 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm6905-201ENSMUST00000205729 511 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Thumpd1Q99J36 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Thumpd1Q99J36 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm15615-201ENSMUST00000118876 198 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm12986-201ENSMUST00000119037 967 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm11956-201ENSMUST00000119525 512 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm37981-201ENSMUST00000194280 535 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm8385-201ENSMUST00000058999 643 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Thumpd1Q99J36 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms