Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 POM121L8P-201ENST00000417732 1281 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 BX842568.4-201ENST00000421222 227 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 POM121L9P-203ENST00000441984 1285 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 AL512638.1-201ENST00000457493 794 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 KRT18P15-201ENST00000458108 1291 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 AC011495.1-201ENST00000498085 584 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LINC02084-201ENST00000606069 1096 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 AC099568.2-201ENST00000609194 695 ntBASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP3Q9Y2W7 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC002350.2-201ENST00000623894 1828 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC060814.4-201ENST00000594169 2163 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 MYCLP2-201ENST00000449268 967 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC055876.2-201ENST00000531834 546 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC092552.1-201ENST00000547243 906 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 AC093726.1-201ENST00000608064 963 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.84□□□□□ -0.51
KCNIP3Q9Y2W7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms