Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Mir1943-201ENSMUST00000158276 73 ntBASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Gm16165-201ENSMUST00000160140 795 ntBASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Gm18827-201ENSMUST00000188341 790 ntBASIC11.29□□□□□ -0.6
Cpne8Q9DC53 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm11411-201ENSMUST00000117951 719 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm1848-201ENSMUST00000120711 789 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm43138-201ENSMUST00000199123 708 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm9102-201ENSMUST00000219250 465 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpne8Q9DC53 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.27□□□□□ -0.6
Cpne8Q9DC53 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cpne8Q9DC53 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpne8Q9DC53 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cpne8Q9DC53 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cpne8Q9DC53 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpne8Q9DC53 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpne8Q9DC53 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.27□□□□□ -0.61
Cpne8Q9DC53 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms