Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.37□□□□□ -0.11
FDFT1P37268 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.37□□□□□ -0.11
FDFT1P37268 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
FDFT1P37268 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 AC108024.1-201ENST00000626286 1721 ntBASIC14.37□□□□□ -0.11
FDFT1P37268 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
FDFT1P37268 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
FDFT1P37268 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 AC073869.1-201ENST00000415574 2762 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.36□□□□□ -0.11
FDFT1P37268 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.36□□□□□ -0.11
FDFT1P37268 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 SERPINA13P-202ENST00000478994 924 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 RN7SL530P-201ENST00000485097 298 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 AC005740.2-201ENST00000511085 419 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.36□□□□□ -0.11
FDFT1P37268 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.36□□□□□ -0.11
FDFT1P37268 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.36□□□□□ -0.11
FDFT1P37268 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
FDFT1P37268 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 AC015967.2-201ENST00000624092 234 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 AC006435.4-201ENST00000625037 234 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 AL356737.1-201ENST00000634391 234 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 AC004241.5-201ENST00000623870 2448 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 AC093462.1-201ENST00000621167 1683 ntBASIC14.36□□□□□ -0.11
FDFT1P37268 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.36□□□□□ -0.11
FDFT1P37268 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.36□□□□□ -0.11
FDFT1P37268 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FDFT1P37268 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 MARK2P16-201ENST00000605714 1723 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FDFT1P37268 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms