Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm15352-201ENSMUST00000118696 270 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Apoc1P34928 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm21778-201ENSMUST00000178779 471 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm7985-201ENSMUST00000183329 981 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Gm28032-201ENSMUST00000184104 96 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Gm37835-201ENSMUST00000193305 361 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm7848-201ENSMUST00000210739 718 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.5□□□□□ -0.89
Apoc1P34928 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.5□□□□□ -0.89
Apoc1P34928 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Apoc1P34928 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Apoc1P34928 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Apoc1P34928 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Apoc1P34928 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Apoc1P34928 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.5□□□□□ -0.89
Apoc1P34928 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Apoc1P34928 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm4917-201ENSMUST00000121452 650 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm24992-201ENSMUST00000157412 130 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Apoc1P34928 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm5468-202ENSMUST00000227851 682 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Ginm1-202ENSMUST00000065124 300 ntBASIC9.49□□□□□ -0.89
Apoc1P34928 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Apoc1P34928 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.49□□□□□ -0.89
Apoc1P34928 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Apoc1P34928 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Apoc1P34928 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.48□□□□□ -0.89
Apoc1P34928 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.48□□□□□ -0.89
Apoc1P34928 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Apoc1P34928 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Apoc1P34928 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Apoc1P34928 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Apoc1P34928 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.48□□□□□ -0.89
Apoc1P34928 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Apoc1P34928 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Apoc1P34928 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Apoc1P34928 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.48□□□□□ -0.89
Apoc1P34928 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms