Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm44664-201ENSMUST00000206841 1786 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Mir291b-201ENSMUST00000104838 79 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm11235-201ENSMUST00000117763 333 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm19798-201ENSMUST00000201502 457 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm19090-201ENSMUST00000218187 774 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm26440-201ENSMUST00000082591 129 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col19a1Q0VF58 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm45663-201ENSMUST00000210429 1632 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm14363-201ENSMUST00000122304 409 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm2328-201ENSMUST00000193525 535 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Gm3379-201ENSMUST00000222259 642 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 CT025538.1-201ENSMUST00000223638 369 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col19a1Q0VF58 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms