Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.77□□□□□ -0.69
Pdx1P52946 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm18776-201ENSMUST00000188833 654 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm33080-201ENSMUST00000205429 172 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 Gm7082-201ENSMUST00000209880 969 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pdx1P52946 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.77□□□□□ -0.69
Pdx1P52946 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Pdx1P52946 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdx1P52946 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.76□□□□□ -0.69
Pdx1P52946 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.76□□□□□ -0.69
Pdx1P52946 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pdx1P52946 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm14807-201ENSMUST00000116640 983 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Gm13019-201ENSMUST00000120000 276 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm26976-201ENSMUST00000182929 908 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Gm37301-201ENSMUST00000195412 568 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.76□□□□□ -0.69
Pdx1P52946 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm7880-201ENSMUST00000203748 871 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.76□□□□□ -0.69
Pdx1P52946 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.76□□□□□ -0.69
Pdx1P52946 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.76□□□□□ -0.69
Pdx1P52946 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pdx1P52946 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Pdx1P52946 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms