Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 GSTM2P1-201ENST00000405166 654 ntBASIC14.02□□□□□ -0.17
VCANP13611 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
VCANP13611 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC14.02□□□□□ -0.17
VCANP13611 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 KRT8P25-201ENST00000473150 1456 ntBASIC14.02□□□□□ -0.17
VCANP13611 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.02□□□□□ -0.17
VCANP13611 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VCANP13611 AL021407.3-201ENST00000407522 486 ntBASIC14.02□□□□□ -0.17
VCANP13611 ACTBP1-201ENST00000417985 1113 ntBASIC14.02□□□□□ -0.17
VCANP13611 OR2A15P-201ENST00000463814 900 ntBASIC14.02□□□□□ -0.17
VCANP13611 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VCANP13611 MTND6P4-201ENST00000506002 522 ntBASIC14.02□□□□□ -0.17
VCANP13611 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC14.02□□□□□ -0.17
VCANP13611 PEBP1P1-201ENST00000554856 510 ntBASIC14.02□□□□□ -0.17
VCANP13611 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VCANP13611 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.02□□□□□ -0.17
VCANP13611 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 AC011498.7-201ENST00000624986 2027 ntBASIC14.01□□□□□ -0.17
VCANP13611 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 WSB1-213ENST00000583193 552 ntTSL 4 BASIC14.01□□□□□ -0.17
VCANP13611 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 AC111170.3-201ENST00000624282 2464 ntBASIC14.01□□□□□ -0.17
VCANP13611 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.01□□□□□ -0.17
VCANP13611 AC114812.4-201ENST00000506676 757 ntBASIC14.01□□□□□ -0.17
VCANP13611 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC14.01□□□□□ -0.17
VCANP13611 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC14.01□□□□□ -0.17
VCANP13611 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VCANP13611 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.01□□□□□ -0.17
VCANP13611 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VCANP13611 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VCANP13611 AC067942.1-202ENST00000471756 1057 ntBASIC14□□□□□ -0.17
VCANP13611 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC14□□□□□ -0.17
VCANP13611 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC14□□□□□ -0.17
VCANP13611 AZU1P1-201ENST00000603479 385 ntBASIC14□□□□□ -0.17
VCANP13611 RN7SL238P-201ENST00000613832 290 ntBASIC14□□□□□ -0.17
VCANP13611 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC14□□□□□ -0.17
VCANP13611 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC14□□□□□ -0.17
VCANP13611 RN7SL106P-201ENST00000618104 290 ntBASIC14□□□□□ -0.17
VCANP13611 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14□□□□□ -0.17
VCANP13611 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VCANP13611 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VCANP13611 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC14□□□□□ -0.17
VCANP13611 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14□□□□□ -0.17
VCANP13611 AC010997.1-201ENST00000447646 350 ntBASIC14□□□□□ -0.17
VCANP13611 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14□□□□□ -0.17
VCANP13611 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC14□□□□□ -0.17
VCANP13611 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms